Query= MSMg01no064_g15.b1 MSMg01no064_g15.b1 CHROMAT_FILE:
MSMg01no064_g15.b1 PHD_FILE: MSMg01no064_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:19 2005
(623 letters)
>mm_chr2_140016620_140017640
Length = 1021
Score = 969 bits (501), Expect = 0.0
Identities = 579/611 (94%), Gaps = 16/611 (2%)
Strand = Plus / Plus
Query: 13 tggaatttccgtccttaactgtgttttcacattttttaaaaattttattggatattttct 72
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 223 tggaatttccgtccttaactgtgttttcacatttttt-taaattttattggatattttct 281
Query: 73 ttatttacatttcaagcgtta-tccctttcccctctccacagtccctcagaaacccccta 131
||||||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||
Sbjct: 282 ttatttacatttcaaatgttacccccttccccctctccacagtcccttagaaacccccta 341
Query: 132 tcccatcccttctccccctgcttcttcgaggatgttcccccacctacccacccactccca 191
||||||||| ||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 342 tcccatcccctctccccctgcttcttcgagggtgttc---------cccacccactccca 392
Query: 192 actccccgccctggcattcccctacactggggcatcaagcctgcataggatcaaggggcc 251
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 actccccgccctggcatt--cctacactggggcatcaagcctgcataggatcaaggggcc 450
Query: 252 aagggcctctcctcccattgatgcctgtcaagttcatcctctgctacatatgtggctaga 311
||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||
Sbjct: 451 aagggcctctcctcccattgatgcccgtcaaggccatcctctgctacatatgtggctgga 510
Query: 312 gccat-ggtcccttcgtgtgtactctttggttggtggtttagtccctgggagctctgggg 370
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gccatgggtccctccgtgtgtactctttggttggtggtttagtccctgggagctctgggg 570
Query: 371 agaatggttggttgatattgttattatatgtgctctccatcttaatatctgcattttctt 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 agaatggttggttgatattgttattatatgtgctctccatcttaatatctgcattttctt 630
Query: 431 tactaatgtgaatatggcatggtttcatttttctctctgaacatttacatttgttccaga 490
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tactaatgtgaatatggcatggtttcatttttctctctgaacatttacatttgttccagg 690
Query: 491 tgttttgttttgctagtagaagcagtgctttaataaatatctttctaatctacatcattt 550
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 691 tgttttgttttgctagtagaagcagtgctttaataaatatctttctaacctacatcattt 750
Query: 551 attcagtcttgcaacaaaatgtttgtttacttgatgagttctgggctggggtgctgttct 610
|||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||
Sbjct: 751 attcagtcttgcaacaaa-tgtttgttta-ttgatgagttctgggctgtggtgctgttct 808
Query: 611 aggtactttgg 621
|||||||||||
Sbjct: 809 aggtactttgg 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1021
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1011
Effective search space: 619743
Effective search space used: 619743
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_g15.g1 MSMg01no064_g15.g1 CHROMAT_FILE:
MSMg01no064_g15.g1 PHD_FILE: MSMg01no064_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:19 2005
(327 letters)
>mm_chr2_140134835_140135561
Length = 727
Score = 553 bits (286), Expect = e-162
Identities = 314/330 (95%), Gaps = 14/330 (4%)
Strand = Plus / Minus
Query: 1 tctccctctctttctt--tctcttcctttattta-tttttatttatttatttatttattc 57
|||||||||||||||| |||||||||||||||| ||||||| |||||||||||
Sbjct: 580 tctccctctctttctttctctcttcctttatttattttttat---tttatttattt---- 528
Query: 58 ccccatttatttttggtattaggtcagacctgaaagtcatccatagtgctttctgccact 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ----atttatttttggtattaggtcagacctgaaagtcatccatagtgctttctgccact 472
Query: 118 ttttatttaattaaaatgtaagagactaggaagtgttatcttggtactgggaagtgcgaa 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 471 ttttatttaattaaaatgtaagagactaggaagtgttatcttggtactgggaagtacgaa 412
Query: 178 cgtgaactttagtgagcttcctgtgtgctttggcatcatgagattctcatattgaggcag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cgtgaactttagtgagcttcctgtgtgctttggcatcatgagattctcatattgaggcag 352
Query: 238 ggaaatctggggcctggcaagggtgtcacctagtctggactctgtagtttcacttggttc 297
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggaaatctggggcctgggaagggtgtcacctagtctggactctgtagtttcacttggttc 292
Query: 298 tcagctgatgatcagctattccagcacaat 327
||||||||||||||||||||||||||||||
Sbjct: 291 tcagctgatgatcagctattccagcacaat 262
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
