Query= MSMg01no064_m20.b1 MSMg01no064_m20.b1 CHROMAT_FILE:
MSMg01no064_m20.b1 PHD_FILE: MSMg01no064_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:02 2005
(329 letters)
>mm_chr2_122650436_122651164
Length = 729
Score = 617 bits (319), Expect = 0.0
Identities = 325/329 (98%), Gaps = 4/329 (1%)
Strand = Plus / Plus
Query: 1 acacacacaacagtacacaacaacacacacatacacacaaactcccaaaacacacactcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 acacacacaacagtacacaacaacacacacatacacacaaactcccaaaacacacactcc 264
Query: 61 ccaaaacacacactcacataccaacaacaacacatacacacacacacacacacacacact 120
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 265 ccaaaacacacactcacataccaacaacaacaca----cacacacacacacacacacact 320
Query: 121 cactcaaatcccagtgagggtagtcttcagacggaggaggaactggtgggaaggtgactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactcaaatcccagtgagggtagtcttcagacggaggaggaactggtgggaaggtgactg 380
Query: 181 cagagtccttttcagagctctcagctgtgaccacacccaactccaccttctgcaatgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagagtccttttcagagctctcagctgtgaccacacccaactccaccttctgcaatgttg 440
Query: 241 aggattcattctatacctcagagcttctttagtaatttcagcgaaggagatgaacgactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggattcattctatacctcagagcttctttagtaatttcagcgaaggagatgaacgactg 500
Query: 301 cttgttacacatcatatttcaatgtcaaa 329
|||||||||||||||||||||||||||||
Sbjct: 501 cttgttacacatcatatttcaatgtcaaa 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_m20.g1 MSMg01no064_m20.g1 CHROMAT_FILE:
MSMg01no064_m20.g1 PHD_FILE: MSMg01no064_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:02 2005
(387 letters)
>mm_chr2_122664677_122665463
Length = 787
Score = 632 bits (327), Expect = 0.0
Identities = 327/327 (100%)
Strand = Plus / Minus
Query: 1 acacccatataaaaaatgttacattaggcagtagcttatagttctaaaaacactaacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 acacccatataaaaaatgttacattaggcagtagcttatagttctaaaaacactaacttg 268
Query: 61 aggaggaaggccagggcccacaattctattgaagctttccaacaagaaagatgagaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aggaggaaggccagggcccacaattctattgaagctttccaacaagaaagatgagaaaat 208
Query: 121 aagactctgtattagtaacctagtgccattcaacaaattgatcaaaattttagcagtatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aagactctgtattagtaacctagtgccattcaacaaattgatcaaaattttagcagtatg 148
Query: 181 aaaaactcacacatttattatttcagtatcggtgagtcaagaatccaagaacaggctatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 aaaaactcacacatttattatttcagtatcggtgagtcaagaatccaagaacaggctatc 88
Query: 241 tgacttttcttgcctaggatctcttaaatggcaaccatcatcttggctgaaggaggatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 tgacttttcttgcctaggatctcttaaatggcaaccatcatcttggctgaaggaggatcc 28
Query: 301 actcccaagctcacacccatgtctctt 327
|||||||||||||||||||||||||||
Sbjct: 27 actcccaagctcacacccatgtctctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
