Query= MSMg01no065_l07.b1 MSMg01no065_l07.b1 CHROMAT_FILE:
MSMg01no065_l07.b1 PHD_FILE: MSMg01no065_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:17 2005
(350 letters)
>mm_chr2_75011789_75012538
Length = 750
Score = 675 bits (349), Expect = 0.0
Identities = 349/349 (100%)
Strand = Plus / Minus
Query: 1 ggccaccagctctaatctcagtataaactttgataatgagttgagcactgactatgtggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ggccaccagctctaatctcagtataaactttgataatgagttgagcactgactatgtggg 490
Query: 61 aaagaacccactctggacagggcaaaaccatgtcttatagagtgctggataatagtgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aaagaacccactctggacagggcaaaaccatgtcttatagagtgctggataatagtgctg 430
Query: 121 tggtcatatcatcaactgtctgtgtaatgcgccgtaattctggtccatcttatgtaggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tggtcatatcatcaactgtctgtgtaatgcgccgtaattctggtccatcttatgtaggat 370
Query: 181 tgacaatgtctggggaggatttgctgcaagtgttgcttctttggtcttaagtgagggata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgacaatgtctggggaggatttgctgcaagtgttgcttctttggtcttaagtgagggata 310
Query: 241 taagattataaatgatagcgtgcctttggccttctgtaagaaacgattgtcttaaatatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 taagattataaatgatagcgtgcctttggccttctgtaagaaacgattgtcttaaatatg 250
Query: 301 accaataccctattgcctcactgtttccttaatagtagctagtctatta 349
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 accaataccctattgcctcactgtttccttaatagtagctagtctatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_l07.g1 MSMg01no065_l07.g1 CHROMAT_FILE:
MSMg01no065_l07.g1 PHD_FILE: MSMg01no065_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:17 2005
(300 letters)
>mm_chr2_74861033_74861731
Length = 699
Score = 505 bits (261), Expect = e-147
Identities = 291/303 (96%), Gaps = 7/303 (2%)
Strand = Plus / Plus
Query: 1 ctttac-aacacaggcttgttctcaaggagttgaagttttacattaaagtatttgatgac 59
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttacaaacacaggcttgttctcaaggagttgaagttttacattaaagtatttgatgac 260
Query: 60 tgttgttttgcttctcccttgccagggagttgggtgttactatgagttatagaattagga 119
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttgtttagcttctcccttgccagggagttgggtgttactatgagttatagaattagga 320
Query: 120 gatttcagagtttgtatccccatgataagatggtgcctcctttgttctgccgaagaagtc 179
||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||
Sbjct: 321 gatttcagagtttgtatccccatgatatgatggtgcctccttt-ttgtgccgaagaagtc 379
Query: 180 ttcatcaagtactaatttagactgacagacacttctctgccttggggtaaggcaggtgtc 239
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 380 ttcatcaagtactaatttagactgacagacacttctctgccttggggtgaggcaggtgtc 439
Query: 240 tcctcttctttc--tcagggctcttcttggtaccttgcttctttgttgggtaagttttgt 297
|||||||| | |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 440 tcctcttc---ccctcagggctcttcttggtaccttgcttctttgttggggaagttttgt 496
Query: 298 ctg 300
|||
Sbjct: 497 ctg 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 699
Length adjustment: 9
Effective length of query: 291
Effective length of database: 690
Effective search space: 200790
Effective search space used: 200790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
