Query= MSMg01no066_l21.b1 MSMg01no066_l21.b1 CHROMAT_FILE:
MSMg01no066_l21.b1 PHD_FILE: MSMg01no066_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:38 2005
(367 letters)
>mm_chr2_93200773_93201540
Length = 768
Score = 681 bits (352), Expect = 0.0
Identities = 364/368 (98%), Gaps = 1/368 (0%)
Strand = Plus / Plus
Query: 1 agtggctatgcaactctccaagctcagcactgaaaaattcatttgtggtcctgaaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtggctatgcaactctccaagctcagcactgaaaaattcatttgtggtcctgaaaaaaa 260
Query: 61 tgcttgtt-ttggcctggccttgaccctcagaaccatgctgccgacagagtatgacacag 119
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcttgttcttggcctggccttggccctcagaaccatgctgccgacagagtatgacacag 320
Query: 120 tgaggctctgggagaagaggtcttgacaagcacccaggtcatcctcattctgatcctatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaggctctgggagaagaggtcttgacaagcacccaggtcatcctcattctgatcctatg 380
Query: 180 ctgtcagaaggatccactcagagctctggaaagttccgagctgtggtttgtgaatagtgg 239
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 ctgtcagaaggatccactcagagctctggaaagttccgagctgtggtttttgaatagtgg 440
Query: 240 caagaaggggatctctatgatgtgagactggaaaacagtcacccccactcctttccctac 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagaaggggatctctatgatgtgagactggaaaacagtcacccccactcctttccctac 500
Query: 300 acactctttgtcctggacccccaaagcaggcaggttctcagggcccagtggataaaagga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acactctttgtcctggacccccaaagcaggcaggttctcagggcccagtggataaaagga 560
Query: 360 aggtgtct 367
||||||||
Sbjct: 561 aggtgtct 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 768
Length adjustment: 9
Effective length of query: 358
Effective length of database: 759
Effective search space: 271722
Effective search space used: 271722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_l21.g1 MSMg01no066_l21.g1 CHROMAT_FILE:
MSMg01no066_l21.g1 PHD_FILE: MSMg01no066_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:38 2005
(254 letters)
>mm_chr2_93305596_93306249
Length = 654
Score = 476 bits (246), Expect = e-139
Identities = 252/254 (99%)
Strand = Plus / Minus
Query: 1 gaagctgcacacctacttccctatttcccacaggacactctagactccccccatctccag 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 454 gaagctgcacacctacttccctatttcccacaggacactctagactgcccccatctccag 395
Query: 61 tctagagtggccttaacaggaaagggttgccaacaggatttaaataggaggggcaaattg 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tctagagtggccttaacaagaaagggttgccaacaggatttaaataggaggggcaaattg 335
Query: 121 gtagtggaggaactatctgggctagggaggggctgatgggacccaggtctttggcctatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gtagtggaggaactatctgggctagggaggggctgatgggacccaggtctttggcctatt 275
Query: 181 gtgtaccattttcctctcaggttgaaacaacccatctttcagggaatcaagttaaacagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gtgtaccattttcctctcaggttgaaacaacccatctttcagggaatcaagttaaacagg 215
Query: 241 aaggcaaacaactc 254
||||||||||||||
Sbjct: 214 aaggcaaacaactc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space: 158025
Effective search space used: 158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
