Query= MSMg01no067_n14.b1 MSMg01no067_n14.b1 CHROMAT_FILE:
MSMg01no067_n14.b1 PHD_FILE: MSMg01no067_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:04 2005
(319 letters)
>mm_chr2_6644468_6645186
Length = 719
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%)
Strand = Plus / Plus
Query: 8 gaattcaataaacaatttagcctgtggagctgtgacagcacaaggtggaggtggctcagc 67
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 208 gaattcaataaacaatttagcctgtggagctgtgatggcacaaggtggaggtggctcagc 267
Query: 68 tctttgcagtagagcataccatgtctatagcactttgaatgctgagaatgtggcaagatt 127
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tctttgcagtagaggataccatgtctatagcactttgaatgctgagaatgtggcaagatt 327
Query: 128 cacttttgggacaggaaggactcgtggttactgctgttgacaaccagctaaatgagaaga 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cacttttgggacaggaaggactcgtggttactgctgttgacaaccagctaaatgagaaga 387
Query: 188 ggaaggtattgccacaagtctaagctaacagaaagcagaagttggacaatgactcatata 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ggaaggtattgccacaagtctaagctaacagaaagcagaagttggacaatgactcatata 447
Query: 248 gagcaagagttagactgcagtacagttgtctaatatctaaacaagagttcgggagtaagc 307
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 448 gagcaagagttagactgcagtacagttgtctaatatctaaacaagagttctggagtaagc 507
Query: 308 actaactaatgc 319
||||||||||||
Sbjct: 508 actaactaatgc 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no067_n14.g1 MSMg01no067_n14.g1 CHROMAT_FILE:
MSMg01no067_n14.g1 PHD_FILE: MSMg01no067_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:04 2005
(240 letters)
>mm_chr2_6822519_6823158
Length = 640
Score = 406 bits (210), Expect = e-118
Identities = 222/226 (98%)
Strand = Plus / Minus
Query: 15 atatatatatatgtatatgtatatataaatatataccacttgagggtagtatatgaagaa 74
|||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 475 atatatatatatatatatatatatatatatatataccacttgagggtagtatatgaagaa 416
Query: 75 aacgggtataaggagactatttaaaatgtgtttcctaagtttaggcaagctgcttcattt 134
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aacgggtataaggatactatttaaaatgtgtttcctaagtttaggcaagctgcttcattt 356
Query: 135 gcttttaacattttaataaaaaaaaagtaatgtattctttcagcttcctagttaagatga 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gcttttaacattttaataaaaaaaaagtaatgtattctttcagcttcctagttaagatga 296
Query: 195 tgtatcaatttatggcccttgacataatccaaagatagaattgtac 240
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgtatcaatttatggcccttgacataatccaaagatagaattgtac 250
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
