Query= MSMg01no068_i23.b1 MSMg01no068_i23.b1 CHROMAT_FILE:
MSMg01no068_i23.b1 PHD_FILE: MSMg01no068_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:01 2005
(320 letters)
>mm_chr2_4341073_4341792
Length = 720
Score = 559 bits (289), Expect = e-164
Identities = 309/317 (97%), Gaps = 4/317 (1%)
Strand = Plus / Plus
Query: 5 gaattcacttgtcaccttataaaccttagtcctggagtctggctttgagtgtttctgacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttgtcaccttataaaccttagtcctggagtctggctttgagtgtttctgacc 264
Query: 65 tgtctctgttgcggagtataggatacctggattcctaggcctaagctgagtgtagcttaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtctctgttgcggagtataggatacctggattcctaggcctaagctgagtgtagcttaa 324
Query: 125 gtgtgtgcttcgggcacagcagtggattaatattgagatggctattagtgttttggatcc 184
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgtgtgctttgggcacagcagtggattaatattgagatggctattagtgttttggatcc 384
Query: 185 cagcaggatcgtgtggacaggattaagttgact--aactgttaggacttgaagcttcaat 242
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 385 cagcaggatcgtgtggacaggattaagttgacttgaa--gttaggacttgaagcttcaat 442
Query: 243 tcacacaggcctctgagaaactgttctcgcctcagacatatttaccccaagctgtcccct 302
||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 443 tcatacaggcctctgagaaactgttctcgcctcagacatagctaccccaagctgtcccct 502
Query: 303 tggcctgaatgaggccc 319
|||||||||||||||||
Sbjct: 503 tggcctgaatgaggccc 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no068_i23.g1 MSMg01no068_i23.g1 CHROMAT_FILE:
MSMg01no068_i23.g1 PHD_FILE: MSMg01no068_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:02 2005
(248 letters)
>mm_chr2_4469538_4470185
Length = 648
Score = 456 bits (236), Expect = e-133
Identities = 245/248 (98%)
Strand = Plus / Minus
Query: 1 tcctcctgcttggactgaacagctcatcgtgtgtagaaattgcctgtctgctcaaggttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tcctcctgcttggactgaacagctcatcgtgtgtagaaattgcctgtctgctcaaggttc 389
Query: 61 cttctcagtacaatctgagcagggcagatcccagcagtagattcttggccgattagcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 388 cttctcagtacaatctgagcagggcagatcccagcagtagattcttggctgattagcagg 329
Query: 121 atctgttgcttagactctgcctagtgaggaaaactgtatttattgggtcctggctgtgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 328 atctgttgcttagactctgcctagtgaggaaaactgtatttattgggtcctagctgtgct 269
Query: 181 ggggatgggtgttaaacaggtttagcagcttttagggaggtcggggcaccctggctttcc 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 268 ggggatgggtgttaaacaggtttagcagtttttagggaggtcggggcaccctggctttcc 209
Query: 241 ccagtgaa 248
||||||||
Sbjct: 208 ccagtgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
