Query= MSMg01no069_k19.b1 MSMg01no069_k19.b1 CHROMAT_FILE:
MSMg01no069_k19.b1 PHD_FILE: MSMg01no069_k19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:29 2005
(289 letters)
>mm_chr2_135964418_135965107
Length = 690
Score = 507 bits (262), Expect = e-148
Identities = 283/290 (97%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 1 agcactctctgaagcttttctcctaatggatgggcatccagggtgtccccgtttgactta 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 agcactctctgaagcttttctcctaatggatgggcatccagggtgtccctgtttgactta 260
Query: 61 aacaagagcagaggtaaaccgctcttttttt-ctgtggggcatatgtcaacagtgaagac 119
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 aacaggagcagaggtaaaccgctcttttttttctgtggggcatatgtcaacagtgaagac 320
Query: 120 catgtggcactgaagagcccatgaaaagaacaggctgggaacttggatgctaatccttag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgtggcactgaagagcccatgaaaagaacaggctgggaacttggatgctaatccttag 380
Query: 180 ccacccaaagatatcagaggcagggacatacagccatcctatattgaccactggacagga 239
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 ccacccaaagatatcagaggcagggacatatagccatcctatattgaccactggacagga 440
Query: 240 tatcctgtttgattttatactagcaagacaatatattaaataatagcctt 289
||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatcctgcaagattttatactagcaagacaatatattaaataatagcctt 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 690
Length adjustment: 9
Effective length of query: 280
Effective length of database: 681
Effective search space: 190680
Effective search space used: 190680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_k19.g1 MSMg01no069_k19.g1 CHROMAT_FILE:
MSMg01no069_k19.g1 PHD_FILE: MSMg01no069_k19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:30 2005
(288 letters)
>mm_chr2_136058165_136058851
Length = 687
Score = 503 bits (260), Expect = e-147
Identities = 281/288 (97%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 1 caagggattagaggccctcaaatgtcgcagttttaattgctattgtaccacccggtgtaa 60
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 487 caagggattagaggccctcatatgtcgcagttttaattgctattgtaccaaaaggtgtaa 428
Query: 61 ttgttataatttgggagcaggaataggctactcctcaacccatatgggggtctcccattt 120
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 427 ttgttataatttgggagtaggaataggctactcctcaacccatat-ggggtctcccattt 369
Query: 121 tccagtggatcttaggtaccagggccccagcagtggcctttagaattaggggtgagatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tccagtggatcttaggtaccagggccccagcagtggcctttagaattaggggtgagatga 309
Query: 181 agggcattgttggccattcttctcaaaatgtggatcgtctctatcatttggaaacaccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 agggcattgttggccattcttctcaaaatgtggatcgtctctatcatttggaaacaccat 249
Query: 241 ctttccctgttcaaaacactgttcattctgttggattaaaggtgtgta 288
|||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 248 ctttccctgttcaaaacactgttcattctgttgggttaaaggtgtgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
