Query= MSMg01no069_p20.b1 MSMg01no069_p20.b1 CHROMAT_FILE:
MSMg01no069_p20.b1 PHD_FILE: MSMg01no069_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:53 2005
(190 letters)
>mm_chr2_120246334_120246923
Length = 590
Score = 352 bits (182), Expect = e-102
Identities = 188/190 (98%)
Strand = Plus / Plus
Query: 1 ttgaaattctgaactcacaacatttttagaaaactaattagtctctgactatttcatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgaaattctgaactcacaacatttttagaaaactaattagtctctgactatttcatatc 260
Query: 61 ttttgtagcttcagagtccctgcagctacaaatacagactcagagtttgatactgcaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttgtagcttcagagtccctgcagctacaaatacagactcagagtttgatactgcaggt 320
Query: 121 tgctgatttatatcataagctgagttcacagtcccctcagatctgtgatctggggcattc 180
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctgaattagatcataagctgagttcacagtcccctcagatctgtgatctggggcattc 380
Query: 181 gctgaaaaaa 190
||||||||||
Sbjct: 381 gctgaaaaaa 390
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 590
Length adjustment: 8
Effective length of query: 182
Effective length of database: 582
Effective search space: 105924
Effective search space used: 105924
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_p20.g1 MSMg01no069_p20.g1 CHROMAT_FILE:
MSMg01no069_p20.g1 PHD_FILE: MSMg01no069_p20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:53 2005
(286 letters)
>mm_chr2_120414992_120415677
Length = 686
Score = 532 bits (275), Expect = e-155
Identities = 284/287 (98%), Gaps = 2/287 (0%)
Strand = Plus / Minus
Query: 1 ttgctcttctgtttatt-acatacaacttagaaacaatcttctagactcacagaggagtt 59
||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||
Sbjct: 486 ttgctcttctgtttattaacatacaacttagaaacaatcttctagactga-agaggagtt 428
Query: 60 tttgttcaagggaatttacctattctctcttcctcaattttccaagatggtacatgaaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tttgttcaagggaatttacctattctctcttcctcaattttccaagatggtacatgaaac 368
Query: 120 aagagacaggaacagaagtttgtaaaacatatctaagactttgaatcaaattatgtaggc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aagagacaggaacagaagtttgtaaaacatatctaagactttgaatcaaattatgtaggc 308
Query: 180 acttgaaatatgtctgcttaattcaatctgctaaacctagttaacacattgtagtttttg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 acttgaaatatgtctgcttaattcaatctgctaaacctagttaacacattgtagtttttg 248
Query: 240 ttgctattgttttggagagagggtttgaactcagtatgtagctgagg 286
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttgctattgttttggagagagggtttgaactcagtatgtagctgagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
