Query= MSMg01no070_h23.b1 MSMg01no070_h23.b1 CHROMAT_FILE:
MSMg01no070_h23.b1 PHD_FILE: MSMg01no070_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:35 2005
(345 letters)
>mm_chr2_35243279_35244023
Length = 745
Score = 644 bits (333), Expect = 0.0
Identities = 342/345 (99%)
Strand = Plus / Minus
Query: 1 cacaccatttacaggcaatggcagccagagttagttgaatattatagtttagtcacatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cacaccatttacaggcaatggcagccagagttagttgaatattatagtttagtcacatct 366
Query: 61 ttgagataaccttatgatacaacacagttccacgcctgactagtccctctaccgactctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttgagataaccttatgatacaacacagttccacgcctgactagtccctctaccgactctc 306
Query: 121 ctcaagattaactctccacagtgcccttatatcagggctaccactcgagtgtatagcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctcaagattaactctccacagtgcccttatatcagggctaccactcgagtgtatagcaaa 246
Query: 181 gaagaaaaggattgagtgaggagaattactggactttcaatgcccgtgactttgattaga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gaagaaaaggattgagtgaggagaattactggactttcaatgcccgtgactttgattagg 186
Query: 241 attataaaagatctttgcgccttgatttcatcatctagcaaaatggggatgagaattatg 300
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 185 attataaaagatctttgcgccttgatttcattatctagtaaaatggggatgagaattatg 126
Query: 301 ataacaatgatagcatctatctttacatgtgtaaaacaggaaata 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ataacaatgatagcatctatctttacatgtgtaaaacaggaaata 81
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no070_h23.g1 MSMg01no070_h23.g1 CHROMAT_FILE:
MSMg01no070_h23.g1 PHD_FILE: MSMg01no070_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:35 2005
(276 letters)
>mm_chr2_35110830_35111506
Length = 677
Score = 462 bits (239), Expect = e-135
Identities = 268/279 (96%), Gaps = 5/279 (1%)
Strand = Plus / Plus
Query: 1 tcttccctagagaagccgtgtttgtattataaatcctgctccattataaatgctctgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttccctagagaagccgtgtttgtattataaatcctgctccattataaatgctctgttt 260
Query: 61 ttcaaatggtgtctggggccatggcgggggtggggggtagggggagtcccatttcacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaaatggtgtctggggccatggcgggggtggggggtagggggagtcccatttcacact 320
Query: 121 ggcttgaaaatgctctcacccttgcttctctgaccagttccccagggaatatttgccttc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcttgaaaatgctctcaccctcgcttctctgaccagttccccagggaatatttgccttc 380
Query: 181 acgctaatatgaaccttggtttatgagggattcaccgcgtttgccatggcgtcaagtatc 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 acgctaatatgaaccttggtttatgagggattcactatgtttgccatggcgtcaagtatc 440
Query: 241 ttttcctctcatagt--a-aagaggctgcactgaggctt 276
||| |||| ||| | | ||||||||||||||||||||
Sbjct: 441 tttccctcccat--ttgacaagaggctgcactgaggctt 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 677
Length adjustment: 9
Effective length of query: 267
Effective length of database: 668
Effective search space: 178356
Effective search space used: 178356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
