Query= MSMg01no074_d23.b1 MSMg01no074_d23.b1 CHROMAT_FILE:
MSMg01no074_d23.b1 PHD_FILE: MSMg01no074_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:33 2005
(321 letters)
>mm_chr2_75207875_75208596
Length = 722
Score = 555 bits (287), Expect = e-162
Identities = 308/315 (97%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 8 gaattccagcaataaa-tattcttgagtgttaagtttgggtccatgggagttgggcatag 66
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattccagcaataaaatattcttgagtgttaagtttgggtccatgggagttgggcatag 267
Query: 67 cactgccttctacacacattcttgtactcctctgccccaggaatattaaagtaaattgga 126
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 268 cactgccttctacagagattcttgtactcctctgccccaggaatattaaagtaaattaaa 327
Query: 127 aacaacagcagtcagaaagtcagcccaaccctgctcatgtctggattgcttgacacactg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aacaacagcagtcagaaagtcagcccaaccctgctcatgtctggattgcttgacacactg 387
Query: 187 ggtggtttaacaccagaaaaacaggcctgttgtgcaccccttggaagcagcgttagcagg 246
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 388 ggtggtttaacaccagaaaaacaggcctggtgtgcaccccttggaagcagcgttagcagg 447
Query: 247 gacaatttcctgtgatacagaccatgtctacgagtccaaccatagatagtgctccagagt 306
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 448 gacaatttcctgtgatacagaccatgtctacgagcccaaccatagatagtgctccagagt 507
Query: 307 gctccttgacctctg 321
|||||||||||||||
Sbjct: 508 gctccttgacctctg 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 722
Length adjustment: 9
Effective length of query: 312
Effective length of database: 713
Effective search space: 222456
Effective search space used: 222456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_d23.g1 MSMg01no074_d23.g1 CHROMAT_FILE:
MSMg01no074_d23.g1 PHD_FILE: MSMg01no074_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:33 2005
(438 letters)
>mm_chr2_75352038_75352875
Length = 838
Score = 808 bits (418), Expect = 0.0
Identities = 433/438 (98%)
Strand = Plus / Minus
Query: 1 taatttgggtttttctttcccctcccaggaaacgtggtgtggtcttctgagtctatgcac 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 638 taatttgggtttttctttcccctcccaggaagcgtggtgtggtcttctgagtctatgcac 579
Query: 61 ttctaatcccaccatgctttattaacttgggaaggtgactttgtatcgccattgcccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ttctaatcccaccatgctttattaacttgggaaggtgactttgtatcgccattgcccttc 519
Query: 121 tggctttcttttccctttggctgtgagctcattgggaacaggagccagacctgctttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tggctttcttttccctttggctgtgagctcattgggaacaggagccagacctgctttgtg 459
Query: 181 cacagttctctttgtgtggaatgcggtgcctgcctccttttaggaggagtttccctaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 458 cacagttctctttgtgtggaatgcggtgcctgcctccttttaggaggagtttcccaaggc 399
Query: 241 atgcattcaatcagcaatgcacaaagaggtcatacaccatccgaagccagcaccatctat 300
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 398 atgcattcaatcagcgatgcacaaagaggtcatacaccatccgaagccagcagcatctat 339
Query: 301 tttggtaagatctgggaaaggctaacccggcatccttcccttaagtatttttatcttccg 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tttggtaagatctggggaaggctaacccggcatccttcccttaagtatttttatcttccg 279
Query: 361 caacacattacttttgtctccagtttcccttctcactgagttgtcacaggctgttagttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 caacacattacttttgtctccagtttcccttctcactgagttgtcacaggctgttagttt 219
Query: 421 agtgtcacagtcaccaag 438
||||||||||||||||||
Sbjct: 218 agtgtcacagtcaccaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
