Query= MSMg01no074_e24.b1 MSMg01no074_e24.b1 CHROMAT_FILE:
MSMg01no074_e24.b1 PHD_FILE: MSMg01no074_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:38 2005
(134 letters)
>mm_chr2_179905312_179905845
Length = 534
Score = 253 bits (131), Expect = 2e-72
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 1 tggaagtggtgtgtaaaagaaactgtgaggactcttgggctttacattctgcgagcacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggaagtggtgtgtaaaagaaactgtgaggactcttgggctttacattctgcgagcacct 260
Query: 61 ctgccctacaggaaggtggtggcaccctacctgactagctacaagcagcccttagacccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgccctacaggaaggtggtggcaccctacctgactagctacaagcagcccttagacccc 320
Query: 121 acccatccgcg 131
|||||||||||
Sbjct: 321 acccatccgcg 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 134
Length of database: 534
Length adjustment: 8
Effective length of query: 126
Effective length of database: 526
Effective search space: 66276
Effective search space used: 66276
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no074_e24.g1 MSMg01no074_e24.g1 CHROMAT_FILE:
MSMg01no074_e24.g1 PHD_FILE: MSMg01no074_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:38 2005
(240 letters)
>mm_chr2_180067975_180068617
Length = 643
Score = 366 bits (189), Expect = e-106
Identities = 223/243 (91%), Gaps = 17/243 (6%)
Strand = Plus / Minus
Query: 1 ttttctcag-acaatagcaagaaaataatatatttctgcttttcacccgaccaa-ccccc 58
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 339 ttttctcagcacaatagcaagaaaataatatatttctgcttttcacccgaccaacccccc 280
Query: 59 ccccccaaaaaaaaagcattctgggttatgtcgatttggaatctacattt-aaaagtttt 117
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 279 ccccccaaaaaaaaagcattctgggttatgtcgatttggaacctacatttaaaaagtttt 220
Query: 118 cacgggaagttttggaaagttttttttttttttttttttttggttttaagacaacctagt 177
||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 219 cacgggaagttttggaaag--------------tattttttggttttaagacaacctagt 174
Query: 178 tccaaacttaacagcaaacctcctgcttcagccttccaaagtgctgaatttacaggcatg 237
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 173 tccaaacttaacagcaaacctcctgcttcagccttccaaagtgctgagtttacaggcatg 114
Query: 238 agc 240
|||
Sbjct: 113 agc 111
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 643
Length adjustment: 9
Effective length of query: 231
Effective length of database: 634
Effective search space: 146454
Effective search space used: 146454
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
