Query= MSMg01no074_m09.b1 MSMg01no074_m09.b1 CHROMAT_FILE:
MSMg01no074_m09.b1 PHD_FILE: MSMg01no074_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:15 2005
(185 letters)
>mm_chr2_85656089_85656674
Length = 586
Score = 302 bits (156), Expect = 1e-86
Identities = 177/184 (96%), Gaps = 1/184 (0%)
Strand = Plus / Plus
Query: 1 gcatcttttaaccagctgtattgagtcctttacaaactgccaacttggctcaacaaactg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcatcttttaaccagctttattgagtcctttacaaactgccaacttggctcaacaaactg 260
Query: 61 tattacctactccatgttcatgtcagtgggatgctggattgcgagggcagagacacgcag 120
|||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 261 tattacctactccatgtttatgtcagtgggatgctggattgggagggtagagatacgcag 320
Query: 121 ctttggaaagaattgagccacagagccttttttttt-aattaaatctgcgtacagctttt 179
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 321 ctttggaaagaattgagccacagagccttttttttttaattaaatctgtgtacagctttt 380
Query: 180 gtta 183
||||
Sbjct: 381 gtta 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 185
Length of database: 586
Length adjustment: 8
Effective length of query: 177
Effective length of database: 578
Effective search space: 102306
Effective search space used: 102306
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no074_m09.g1 MSMg01no074_m09.g1 CHROMAT_FILE:
MSMg01no074_m09.g1 PHD_FILE: MSMg01no074_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:15 2005
(225 letters)
>mm_chr2_85785794_85786418
Length = 625
Score = 427 bits (221), Expect = e-124
Identities = 224/225 (99%)
Strand = Plus / Minus
Query: 1 ataataaatattggtagtttatgatatataaaataatcagcatgttaaaaaataattgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ataataaatattggtagtttatgatatataaaataatcagcatgttaaaaaataattgcc 366
Query: 61 ttcaatctttataatatgattctgatccctaagaatcactcacagcctaaggatgcaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttcaatctttataatatgattctgatccctaagaatcactcacagcctaaggatgcaata 306
Query: 121 attttctcaaaatcattatttgtttgcaacaaaactcatggcatgtacacgcctatacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 attttctcaaaatcattatttgtttgcaacaaaactcatggcatgtacacgcctatacac 246
Query: 181 attcaccccatgttcataaataaatctaaaaatcatttaaataat 225
|||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 245 attcaccccatgctcataaataaatctaaaaatcatttaaataat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 625
Length adjustment: 9
Effective length of query: 216
Effective length of database: 616
Effective search space: 133056
Effective search space used: 133056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
