Query= MSMg01no075_d22.b1 MSMg01no075_d22.b1 CHROMAT_FILE:
MSMg01no075_d22.b1 PHD_FILE: MSMg01no075_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:52 2005
(575 letters)
>mm_chr2_104821108_104822083
Length = 976
Score = 1064 bits (550), Expect = 0.0
Identities = 562/566 (99%), Gaps = 1/566 (0%)
Strand = Plus / Minus
Query: 11 gaattcctaaggaactgaaaaggcaatgaaaattgatactaagaaaaggcaattttgtga 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 gaattcctaaggaactgaaaaggcaatgaaaattgatactaagaaaaggcaattttgtga 717
Query: 71 tccatcattcttgaagtgaaatgttgctttgcaactttaatttacgtcattttctacaat 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tccatcattcttgaagtgaaatgttgctttgcaactttaatttacgtcattttctacaat 657
Query: 131 tgttttacacattttatcaaaattagcatttagtgtaaaagaagcaaatgtgacaaagga 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tgttttacacattttatcaaaattagcatttagtgtaaaagaagcaaatgtgacaaagga 597
Query: 191 agtagctgtttacagtatattatctcctaactagtacacagtaacctactcctgccatgg 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 agtagctgtttacagtatattatctcctaactagtacacagtaacctactcctgccatgg 537
Query: 251 ctctgacccagctcaacagaactcctggggctttgctcacctgccatggcttacacattc 310
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ctctgacccagctcaacaggactcctggggctttgctcacctgccatggcttacacattc 477
Query: 311 taagtcactaagatacaccgaatcattttattaaaacacaaattaatttccttgtcacat 370
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 476 taagtcactaagatacaccgaatcattttattaaaacacaaattaatttctttgtcacat 417
Query: 371 attaatagctattctatatcgtcatattgactttatatgtatatataaaacacatatgca 430
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 416 attaatagctattctatatcgtcacattgactttatatgtatatataaaacacatatgca 357
Query: 431 tatagtcttccatgcatgaaaacctcagagggaattgtattaaatttagttttaaaaaat 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tatagtcttccatgcatgaaaacctcagagggaattgtattaaatttagttttaaaaaat 297
Query: 491 atactcactttgggggaaatatgattgcaggaagaaaatgtgtctgac-ttatcaatttt 549
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 296 atactcactttgggggaaatatgattgcaggaagaaaatgtgtctgactttatcaatttt 237
Query: 550 gcagtattttcttagcattcaatagt 575
||||||||||||||||||||||||||
Sbjct: 236 gcagtattttcttagcattcaatagt 211
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 976
Length adjustment: 10
Effective length of query: 565
Effective length of database: 966
Effective search space: 545790
Effective search space used: 545790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_d22.g1 MSMg01no075_d22.g1 CHROMAT_FILE:
MSMg01no075_d22.g1 PHD_FILE: MSMg01no075_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:52 2005
(491 letters)
>mm_chr2_104712398_104713288
Length = 891
Score = 919 bits (475), Expect = 0.0
Identities = 487/491 (99%)
Strand = Plus / Plus
Query: 1 agggcagaaactcaagcaaggcaggaacctggagacaggaacagaagcagaggccatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggcagaaactcaagcaaggcaggaacctggagacaggaacagaagcagaggccatgaa 260
Query: 61 ggaacgttgtttactggcttgttccctacggctctctcagcttgctttttcacacaaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaacgttgtttactggcttgttccctacggctctctcagcttgctttttcacacaaccc 320
Query: 121 agacttcctgcccattgccaacagtgggttgtgtgttctcacatcagcatttaccaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agacttcctgcccattgccaacagtgggttgtgtgttctcacatcagcatttaccaagaa 380
Query: 181 agtgcccacagacatgcctaaagttcaccctgatagaggtggttaccaggtgactctggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgcccacagacatgcctaaagttcaccctgatagaggtggttaccaggtgactctggc 440
Query: 241 ttctgtcaacctgaccaaaaaaacttaccagcattttatgttccgttgtcaatgtgtgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctgtcaacctgaccaaaaaaacttaccagcattttatgttccgttgtcaatgtgtgcc 500
Query: 301 gcagcgtttatgtggagattagagaaaccctcatccggtcggttttctcctccgctgtgt 360
|||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 501 gcagcgtttatgtggagattagagaaaccctcgtcgggtcggttttctcctccactgtgt 560
Query: 361 agctccatgggtggcagggattgaactctggttgtcaggtttggctgcggacgacatctc 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 agctccatgggtggcagggattgaactctgtttgtcaggtttggctgcggacgacatctc 620
Query: 421 cacttgctgcaccttcttgtcagttctacatataccaagcccacagataattgaattcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacttgctgcaccttcttgtcagttctacatataccaagcccacagataattgaattcaa 680
Query: 481 agctcctggtt 491
|||||||||||
Sbjct: 681 agctcctggtt 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
