Query= MSMg01no076_a16.b1 MSMg01no076_a16.b1 CHROMAT_FILE:
MSMg01no076_a16.b1 PHD_FILE: MSMg01no076_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:53 2005
(656 letters)
>mm_chr2_116991155_116992209
Length = 1055
Score = 930 bits (481), Expect = 0.0
Identities = 506/515 (98%), Gaps = 4/515 (0%)
Strand = Plus / Minus
Query: 141 gctcatgactgtctgtgatttcagttccaagggcagattctctcttctgtcctcctcagg 200
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 gctcatgactgtctgtgacttcagttccaagggcagattctctcttctgtcctcctcagg 996
Query: 201 cactgtatgtatatggtgcagacacatgcaggcaaacactcacacacataaaatataagt 260
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 cactatatgtatatggtgcagacacatgcaggcaaacactcacacacataaaatataagt 936
Query: 261 aaggcctccctttctactcattttaaggaaggtttgacttcactatataagatgtctcca 320
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 aaggcctccctttctactcattttaaggaaggtttgacttcactatataagatgtctccc 876
Query: 321 aaaacaaaacaaaacaaaacaaacaaac-aaaaagcagcttaaaagagcttccatgtcat 379
||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 875 aaaacaaaacaaaac-aaacaaacaaacaaaaaaacagcttaaaagagcttccatgtcat 817
Query: 380 aaattaagtcagaaatttggggacaacatagatgtacaaaagtaaagatgtacaaactta 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 aaattaagtcagaaatttggggacaacatagatgtacaaaagtaaagatgtacaaactta 757
Query: 440 aaaataccattaagccaaatcaacttcccattggaatgttcttctgttgtataagccacg 499
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 756 aaaataccattaagccaaatcaacttcccattgaaatgttcttctgttgtataagccacg 697
Query: 500 gttgtggacattttgatatggagatatggctgccatcttcctgactatatgctactaaca 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gttgtggacattttgatatggagatatggctgccatcttcctgactatatgctactaaca 637
Query: 560 atttgcaattcctttttttctataaactttcttaagtggaaagtagtgaacaggtgtgta 619
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 atttgcaattccttttt--ctataaactttcttaagtggaaagtagtgaacaggtgtgta 579
Query: 620 ttgttaattttgttggcttgccaaatcatatatgg 654
|||||||||||||||||||||||||||||||||||
Sbjct: 578 ttgttaattttgttggcttgccaaatcatatatgg 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1055
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1045
Effective search space: 675070
Effective search space used: 675070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_a16.g1 MSMg01no076_a16.g1 CHROMAT_FILE:
MSMg01no076_a16.g1 PHD_FILE: MSMg01no076_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:53 2005
(516 letters)
>mm_chr2_116845101_116846015
Length = 915
Score = 511 bits (264), Expect = e-149
Identities = 273/276 (98%), Gaps = 2/276 (0%)
Strand = Plus / Plus
Query: 1 tcctgccctgacttttgcctctgccctcctcaaa-tgtatgttatgaagctacaggttta 59
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 200 tcctgccctgacttttgcctctgccctcctcaaaatgtatgttatgaagctacaggttta 259
Query: 60 gccccctccccctggaccctcactcatgcccatattaaaggaagtacagaaaagttaagc 119
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 260 gccccctccccctggaccctcactcatgcccatgttaaaggaagtacagaaaagttaagc 319
Query: 120 aacctgcccaaggttacagtaattccagtactgcagttgcttgattaagagtgtaactag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aacctgcccaaggttacagtaattccagtactgcagttgcttgattaagagtgtaactag 379
Query: 180 gccattctcagctgcactctccaggcctcctttaatatatgctcatcattaggcagctga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gccattctcagctgcactctccaggcctcctttaatatatgctcatcattaggcagctga 439
Query: 240 aaaaaatgtttggggttacttcaccctccacctccc 275
||||||||||||||||||||||||||||| ||||||
Sbjct: 440 aaaaaatgtttggggttacttcaccctcc-cctccc 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 915
Length adjustment: 10
Effective length of query: 506
Effective length of database: 905
Effective search space: 457930
Effective search space used: 457930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
