Query= MSMg01no076_b06.b1 MSMg01no076_b06.b1 CHROMAT_FILE:
MSMg01no076_b06.b1 PHD_FILE: MSMg01no076_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:56 2005
(435 letters)
>mm_chr2_43870353_43871188
Length = 836
Score = 804 bits (416), Expect = 0.0
Identities = 428/432 (99%), Gaps = 1/432 (0%)
Strand = Plus / Plus
Query: 5 gaattctgaacctaacgataagaactaaacaggcaagaataattttattttgagctacaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgaacctaatgataagaactaaacaggcaagaataattttattttgagctacaa 264
Query: 65 tgtgtgtgttctctaggtgtataaggctttaaactcccatggctttccagttcatgtggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtgtgtgttctctaggtgtataaggctttaaactcccatggctttccagttcatgtggg 324
Query: 125 tgataacatgattttttttt-aacattgatgtttttgatggtagaacatggtactaaatc 183
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgataacatgattttttttttaacattgatgtttttgatggtagaacatggtactaaatc 384
Query: 184 tctagactgcataaaaattactttctactgtttattaagagttcttaatgtgcatatgta 243
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctagactgcataaaaactactctctactgtttattaagagttcttaatgtgcatatgta 444
Query: 244 atactaatcattgccgtagttcagtttacatccaaatgtttaaaaaggagtggcttcctt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atactaatcattgccgtagttcagtttacatccaaatgtttaaaaaggagtggcttcctt 504
Query: 304 aaaacatgcaggatgtaattaacataactgatgaacaaagcagtgtgtatgaatgccact 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaaacatgcaggatgtaattaacataactgatgaacaaagcagtgtgtatgaatgccact 564
Query: 364 tgagctgtattccaacctgtattacaattcagccaccaacatagtgcttacaggccacct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgagctgtattccaacctgtattacaattcagccaccaacatagtgcttacaggccacct 624
Query: 424 gcatatcattag 435
||||||||||||
Sbjct: 625 gcatatcattag 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 836
Length adjustment: 9
Effective length of query: 426
Effective length of database: 827
Effective search space: 352302
Effective search space used: 352302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_b06.g1 MSMg01no076_b06.g1 CHROMAT_FILE:
MSMg01no076_b06.g1 PHD_FILE: MSMg01no076_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:56 2005
(365 letters)
>mm_chr2_44066001_44066765
Length = 765
Score = 667 bits (345), Expect = 0.0
Identities = 360/365 (98%)
Strand = Plus / Minus
Query: 1 ttaggcagtattgtagataatgaagttcttagtgaagtatgagctcatgatcacttacaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 565 ttaggcagtattgtagataatgaagttcttagtgaagtgtgagctcatgatcacttacaa 506
Query: 61 aggttttatagctataatatcatacttacagagacaaatgagtagcgctaaagcaattaa 120
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 505 aggttttatagctataatatcacacttacagagacaaatgggtagcgctaaagcaattaa 446
Query: 121 ggattatttaaaaacattcctggaactttagaaatgttttcaataaagacttttctgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggattatttaaaaacattcctggaactttagaaatgttttcaataaagacttttctgcaa 386
Query: 181 aacaaatagataaatattaaatcattatgtttcaaacatgcatgaattgttaattactga 240
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 385 aacaaatagataaatatcaaatcattatgtttcaaacatgcatgaattgttaattagtga 326
Query: 241 aacctccattgtatggaggatcaaacagactcttctaaaacatgcagctaatgatatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacctccattgtatggaggatcaaacagactcttctaaaacatgcagctaatgatatttc 266
Query: 301 ttttaggtacagcttaaaacaagtgctagtttataaataagtacatatgagtaacttccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttttaggtacagcttaaaacaagtgctagtttataaataagtacatatgagtaacttccc 206
Query: 361 ttcaa 365
|||||
Sbjct: 205 ttcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
