Query= MSMg01no076_d16.b1 MSMg01no076_d16.b1 CHROMAT_FILE:
MSMg01no076_d16.b1 PHD_FILE: MSMg01no076_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:08 2005
(637 letters)
>mm_chr2_9894477_9895513
Length = 1037
Score = 1185 bits (613), Expect = 0.0
Identities = 628/633 (99%)
Strand = Plus / Plus
Query: 5 gaattcagctctggccaggtagagacagacagactcctagtcagccagtctagcctaaaa 64
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgctctggggaggtagagacagacagactcctagtcagccagtctagcctaaaa 264
Query: 65 gtcaagttccagattccagtgagactttgtctcaaaaagcaagatcggagtggagaaagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtcaagttccagattccagtgagactttgtctcaaaaagcaagatcggagtggagaaagg 324
Query: 125 ctgaactacctacccttcagctattaaaggttactgctctgtcagaggactggagtctga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgaactacctacccttcagctattaaaggttactgctctgtcagaggactggagtctga 384
Query: 185 ccccagctcccacatgggcgctcacagcttcctggaactccagttccagggcacctgaca 244
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccccagctcccacatgggagctcacagcttcctggaactccagttccagggcacctgaca 444
Query: 245 tcctcttctggcttctctgggctccaggatatatgtgatgcacatgaactcacatagata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcctcttctggcttctctgggctccaggatatatgtgatgcacatgaactcacatagata 504
Query: 305 tcccagcccatactacatgccacacacagtcctaacaacccagcttcacacagctgtact 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcccagcccatactacatgccacacacagtcctaacaacccagcttcacacagctgtact 564
Query: 365 taactgcaactgactgaactgatgaaataatacacatttttgaagctagcaacaaatgaa 424
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taactgtaactgactgaactgatgaaataatacacatttttgaagctagcaacaaatgaa 624
Query: 425 agctctctagtacaaatgaagagatccttgaattttaattcttatacgacttgtctctac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agctctctagtacaaatgaagagatccttgaattttaattcttatacgacttgtctctac 684
Query: 485 aaaacatttctcatgctaagaactaactcctgagtaaaattaaagagttaaaagagaata 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaaacatttctcatgctaagaactaactcctgagtaaaattaaagagttaaaagagaata 744
Query: 545 atctagaaggtgaaattatctttaagatacaactgtgcatttcaaaaaacatagttgtta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atctagaaggtgaaattatctttaagatacaactgtgcatttcaaaaaacatagttgtta 804
Query: 605 cattaaattcaagtgtgaaaatttggcttttac 637
|||||||||||||||||||||||||||||||||
Sbjct: 805 cattaaattcaagtgtgaaaatttggcttttac 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_d16.g1 MSMg01no076_d16.g1 CHROMAT_FILE:
MSMg01no076_d16.g1 PHD_FILE: MSMg01no076_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:08 2005
(300 letters)
>mm_chr2_10046083_10046782
Length = 700
Score = 572 bits (296), Expect = e-168
Identities = 299/300 (99%)
Strand = Plus / Minus
Query: 1 attccaggaatgtgttcgcagtggccttttgtactattccctttatacttcataattttg 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 attccaggaatgtgtttgcagtggccttttgtactattccctttatacttcataattttg 441
Query: 61 aaatgttttttaataaaagaagtcaacagctctgctattattcataggtaggcccattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaatgttttttaataaaagaagtcaacagctctgctattattcataggtaggcccattat 381
Query: 121 ccattgggagcattatgtgttaaagctacataatgttcccataggttgttggaatgggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccattgggagcattatgtgttaaagctacataatgttcccataggttgttggaatgggtg 321
Query: 181 ttaatcacctggacaccaatgtagccatctctactgcatgctcataggtccatgtcctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttaatcacctggacaccaatgtagccatctctactgcatgctcataggtccatgtcctct 261
Query: 241 taaacttcctgtaacatagtatattgctctgcatacaacctcagatttttcctaatgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 taaacttcctgtaacatagtatattgctctgcatacaacctcagatttttcctaatgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 700
Length adjustment: 9
Effective length of query: 291
Effective length of database: 691
Effective search space: 201081
Effective search space used: 201081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
