Query= MSMg01no076_e14.b1 MSMg01no076_e14.b1 CHROMAT_FILE:
MSMg01no076_e14.b1 PHD_FILE: MSMg01no076_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:12 2005
(488 letters)
>mm_chr2_169962221_169963108
Length = 888
Score = 884 bits (457), Expect = 0.0
Identities = 478/485 (98%), Gaps = 2/485 (0%)
Strand = Plus / Minus
Query: 5 ggaattccatattctgtcct-ggggactattccgtgactacagaggtattccaccacacc 63
|||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ggaattccatattctggcttaggggactattccgtgactacagaggtattccaccacacc 488
Query: 64 tgcctgtaatacctaaggcctgatttccaggaagggaatctctacttctgctctccagtt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tgcctgtaatacctaaggcctgatttccaggaagggaatctctacttctgctctccagtt 428
Query: 124 cccttctgtctgtctctgagagataagccccgagggacaaggactcattgttctgcctcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cccttctgtctgtctctgagagataagccccgagggacaaggactcattgttctgcctcc 368
Query: 184 tgtgtttacagccgctggcttagggtgcctgggccaggaggtggggttagctcagacctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgtgtttacagccgctggcttagggtgcctgggccaggaggtggggttagctcagacctg 308
Query: 244 aagcctctatagttatggaaatatgtatcatttctgcagataatctggataattgcatta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 307 aagcctctatagttatggaaatatgtatcatttctgcagataatctggataattgca-tg 249
Query: 304 ccattatttcttagcatgcccatgtcccttaacatcttaatttgtcttttggcagtattg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ccattatttcttagcatgcccatgtcccttaacatcttaatttgtcttttggcagtattg 189
Query: 364 gggatggaaactccagccccttgcatgctaggaagtgctgtaccactgagctacaccccc 423
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gggatgggaactcgagccccttgcatgctaggaagtgctgtaccactgagctacaccccc 129
Query: 424 aggcctgttttgctttgaaacagcaaactgcttcggcctcctaagtgttgaggattttgc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 aggcctgttttgctttgaaacagcaaactgcttcggcctcctaagtgttgaggattttgc 69
Query: 484 gtatc 488
|||||
Sbjct: 68 gtatc 64
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_e14.g1 MSMg01no076_e14.g1 CHROMAT_FILE:
MSMg01no076_e14.g1 PHD_FILE: MSMg01no076_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:12 2005
(339 letters)
>mm_chr2_169785071_169785809
Length = 739
Score = 617 bits (319), Expect = 0.0
Identities = 334/339 (98%)
Strand = Plus / Plus
Query: 1 atttggggttttgttactggcaaagattccaacagagagctcacagttctggggtgtttc 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 atttggggttttgttactggcaaagattccgacagagagctcacagttctggggtgtttc 260
Query: 61 cgccatgagttcccagtgccccaagtgtgttcttgttctcatgcaaaattgaaaatgggc 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgccatgagttctcagtgccccaagtgtgttcttgttctcatgcaaaattgaaaatgggc 320
Query: 121 cgcaatagccagccctatcttttctccccataaactgagatacttctgtggatgcagtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgcaatagccagccctatcttttctccccataaactgagatacttctgtggatgcagtgc 380
Query: 181 atgcagagtagactgtagactggcctttgatactgcaaagacgccagctaaagattttcg 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 atgcagagtagactgtagactggcctttgatactgcaaagatgccagctaaagattttcg 440
Query: 241 ctacatgcagggtgtggagcaaaggtaagtgggtctcttgtgaattctaggccagcctag 300
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 ctacaggcagggtgtggagcaaaggtaagtgggtctcttgtgaattcaaggccagcctag 500
Query: 301 tctatatagagttctaagccagccagggctatgctacat 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctatatagagttctaagccagccagggctatgctacat 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
