Query= MSMg01no078_e20.b1 MSMg01no078_e20.b1 CHROMAT_FILE:
MSMg01no078_e20.b1 PHD_FILE: MSMg01no078_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:35 2005
(644 letters)
>mm_chr2_72518553_72519596
Length = 1044
Score = 1191 bits (616), Expect = 0.0
Identities = 634/640 (99%)
Strand = Plus / Minus
Query: 5 gaattccaggcttacctgagataagaatgaaatgttgtctcaacgacagtaacttcaggg 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 gaattccaggcttatctgagataagaatgaaatgttgtctcaacgacagtaacttcaggg 787
Query: 65 tgaagaacaagacttggcaactttattctctggaattcttcatgctctgggatttattct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tgaagaacaagacttggcaactttattctctggaattcttcatgctctgggatttattct 727
Query: 125 tggtgagggatgcagtcttgttttatcagcaaatgactgggaacaatccagtgcttacca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tggtgagggatgcagtcttgttttatcagcaaatgactgggaacaatccagtgcttacca 667
Query: 185 atacactaccagctaagtactcttgtctttccatacaatagaacagttttcaactgctaa 244
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 666 atacactaccagctaagtactcttgtgtttccatacaatagaacagttttcaactgctaa 607
Query: 245 gagcagaacagcttctagaaaaaatttacaaaaccattaattagatagtgaactaaagtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gagcagaacagcttctagaaaaaatttacaaaaccattaattagatagtgaactaaagtt 547
Query: 305 ttactatttatcttacaggcagggttccaaatccttcatgttaactgatcagtcatcacc 364
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 546 ttactatttatcttacaggcagggttccaaatctttcatgttaactgatcagtcatcacc 487
Query: 365 atccagagtacattgccactaacatcccagtttcagccatagagaacctaaggctaaata 424
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 attcagagtacattgccactaacatcccagtttcagccatagagaacctaaggctaaata 427
Query: 425 tcttagcagagctgggatttgaacaccaactccagagttcaaagtctatgatcttaaaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tcttagcagagctgggatttgaacaccaactccagagttcaaagtctatgatcttaaaga 367
Query: 485 acgaatgccaagacaatgacagttgtttagggtgacaaagtctgagggagttagaaggag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 acgaatgccaagacaatgacagttgtttagggtgacaaagtctgagggagttagaaggag 307
Query: 545 atgttttaactgtgtttcattcttcagttacttcacaggcacacgtaagcatctacccat 604
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 atgttttaactgtgcttcattcttcagttacttcacaggcacacgtaagcatctacccat 247
Query: 605 cagttcccacttagaaacaggtagatgaagaagtgataac 644
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 246 cagttcccacttagaaacaagtagatgaagaagtgataac 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_e20.g1 MSMg01no078_e20.g1 CHROMAT_FILE:
MSMg01no078_e20.g1 PHD_FILE: MSMg01no078_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:35 2005
(614 letters)
>mm_chr2_72356694_72357707
Length = 1014
Score = 1112 bits (575), Expect = 0.0
Identities = 605/615 (98%), Gaps = 2/615 (0%)
Strand = Plus / Plus
Query: 1 atctcagcttccactgatgtggtctttcccccctggctttctgtctcaccactttggata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctcagcttccactgatgtggtctttcccccctggctttctgtctcaccactttggata 260
Query: 61 attatgagggctttggcccattgctgcagccacagaaggcaccagcagtccaggtggccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attatgagggctttggcccattgctgcagccacagaaggcaccagcagtccaggtggccc 320
Query: 121 agggaagatctgtgggttgtggtgtctgggaccgtaagaggagcccatgggaaaaatgag 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 agggaagatctgtgggttgtggtgtctgggaccttaagaggagcccatgggaaaaatgag 380
Query: 181 tggcggttgtggacttcatctctgccactctcccggctctcctgcgggcgtcctcc-cac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 381 tggcggttgtggacttcatctctgccactctcccggctctcctgcgggcgtcc-cctcac 439
Query: 240 ctctgcatgcttcacccccacttctcatggaatctcaccttggggatctcagccacaagc 299
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctctgcatgcttcacctcctcttctcatggaatctcaccttggggatctcagccacaagc 499
Query: 300 ggcgtatattcaggaaaagagaagcaaagtaatatccgtgcctgcttcacagcactgaat 359
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 500 ggcgtatatccaggaaaagagaagcaaagtaatatctgtgcctgcttcacagcactgaat 559
Query: 360 ccccctgctccctcccgactccctcagaccgtaccctctgtgcacaactttcatctccaa 419
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cccgctgctccctcccgactccctcagaccgtaccctctgtgcacaactttcatctccaa 619
Query: 420 gtcattcataagatgtcaaaggatgtatactaaaccacccaggaagtagagacatttgag 479
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 620 gtcattcataagatgtcaaaggatgtacactaaaccacccaggaagtagagacatttgag 679
Query: 480 aggcaaggatccaggacttgtatcaattgtggaagatgtggcaaggctggaactcactgg 539
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 680 aggcaaggatccaggacttgtatcaattgtggaagatgtggcagggctggaactcactgg 739
Query: 540 gttcctctgattttcccctctgctttgacttgaagtatggttcttaagcataaggatttg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gttcctctgattttcccctctgctttgacttgaagtatggttcttaagcataaggatttg 799
Query: 600 taggtcatgaccgtg 614
|||||||||||||||
Sbjct: 800 taggtcatgaccgtg 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
