Query= MSMg01no079_e02.b1 MSMg01no079_e02.b1 CHROMAT_FILE:
MSMg01no079_e02.b1 PHD_FILE: MSMg01no079_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:50 2005
(605 letters)
>mm_chr2_93673552_93674556
Length = 1005
Score = 1118 bits (578), Expect = 0.0
Identities = 595/602 (98%), Gaps = 4/602 (0%)
Strand = Plus / Plus
Query: 6 gaattcagttcctctgttagagcttctggtgctcttcaccgctgacccatcttggcagcc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcagttcctctgttagagcttctggtgctcttcaccgctgacccatcttggcagcc 265
Query: 66 tgatactgtcctttaaaggcatgaagaaactgggacaggagtgagttgacacgttgtctt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgatactgtcctttaaaggcatgaagaaactgggacaggagtgagttgacacgttgtctt 325
Query: 126 ggaaggagttgcagatgcaacatcaacagaggaaatcagaaaataaccactaactacaga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggaaggagttgcagatgcaacatcaacagaggaaatcagaaaataaccactaactacaga 385
Query: 186 attctataaccagtaaagttatgttccaaaaagggagcaaaactggcatcctcagacaag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 attctataaccagtaaagttatgttccaaaaagggagcaaaactggcatcctcagacaag 445
Query: 246 cagggattgaaagtctgtctctagcaaactctccaatcccaccccaggagctgcacaaca 305
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 446 cagggattgaaagtctgtctcttgcaaactctccaatcccaccccaggagctgcacaaca 505
Query: 306 gacagaagacacgtggcttccagtggatggcc--ggaataactctgtgatcacctgaagc 363
|||||||||||||||||| |||||||||| | || |||||||||||||||||||||||
Sbjct: 506 gacagaagacacgtggctcccagtggatg--cttgggataactctgtgatcacctgaagc 563
Query: 364 aaacgtcacctgtgtaaaacaagactttgcagggtcaaaactgaaaagcacaaatgaaca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaacgtcacctgtgtaaaacaagactttgcagggtcaaaactgaaaagcacaaatgaaca 623
Query: 424 cagaccacaaacccagccaggggtcaccagggatttggggtctcccattgctatagggaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cagaccacaaacccagccaggggtcaccagggatttggggtctcccattgctatagggaa 683
Query: 484 agctgaggcatgtttgctttcctattaacaaattgtttgtaggtgttatattctaggata 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agctgaggcatgtttgctttcctattaacaaattgtttgtaggtgttatattctaggata 743
Query: 544 acagccagcaggaaaatacagcatatggtaaaatgagtagaagatgaagaggggaaatca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acagccagcaggaaaatacagcatatggtaaaatgagtagaagatgaagaggggaaatca 803
Query: 604 aa 605
||
Sbjct: 804 aa 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_e02.g1 MSMg01no079_e02.g1 CHROMAT_FILE:
MSMg01no079_e02.g1 PHD_FILE: MSMg01no079_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:50 2005
(520 letters)
>mm_chr2_93791724_93792643
Length = 920
Score = 787 bits (407), Expect = 0.0
Identities = 422/427 (98%)
Strand = Plus / Minus
Query: 1 taggcattggactcatcaagtaggaatattgccatgggtttcttaacccagtccgtcact 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 427 taggcattggactcatcaagtaggaatattgccatgggtttcttaacccagttcgtcact 368
Query: 61 gtaactgggggtgggggtggcttgtggcttctcttgcagttgatctgtaacgactatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gtaactgggggtgggggtggcttgtggcttctcttgcagttgatctgtaacgactatgga 308
Query: 121 ggattgcttgtgactcctctgttcctgcttccagatttgcctcattcttgagatcttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 caattgcttgtgactcctctgttcctgcttccagatttgcctcattcttgagatcttcca 248
Query: 181 gcctctgccacttgagcatctcctcctccccgtgtagcaccatgatcggcactgaagcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gcctctgccacttgagcatctcctcctccccgtgtagcaccatgatcggcactgaagcag 188
Query: 241 aagccgtggaggaactctgtctgctggcttgctcctcatggctggctcagcttgatttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 aagccgtggaggaactctgtctgctggcttgctcctcatggctggctcagcttgatttct 128
Query: 301 tacacaaccctggacaaccagcctaggagtgacactgcccacagtggactgggctctccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tacacaaccctggacaaccagcctaggagtgacactgcccacagtggactgggctctccc 68
Query: 361 ataccaattatttatcaacagaaagcctcacagacttgccaaccaataatctgatggaaa 420
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 67 acaccaattatttatcaacagaaagtctcacagacttgccaaccaataatctgatggaaa 8
Query: 421 catttct 427
|||||||
Sbjct: 7 catttct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
