Query= MSMg01no079_f04.b1 MSMg01no079_f04.b1 CHROMAT_FILE:
MSMg01no079_f04.b1 PHD_FILE: MSMg01no079_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:55 2005
(648 letters)
>mm_chr2_128119257_128120304
Length = 1048
Score = 1178 bits (609), Expect = 0.0
Identities = 639/657 (97%), Gaps = 13/657 (1%)
Strand = Plus / Plus
Query: 5 gaattctcatgaatgcatctctgacatgtgcgaaaatgctagatttttagaagtattgag 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gaattctcatgaatggatctctgacatgtgcgaaaatgctagatttttagaagtattgag 251
Query: 65 tatatgcatcttatgggggaaatctatgaatttcattagatattcaaaaaagtaggtcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tatatgcatcttatgggggaaatctatgaatttcattagatattcaaaaaagtaggtcat 311
Query: 125 gctccagaagttcctcccaaatgtggggctcatccgagggctcatcttacgttattgctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gctccagaagttcctcccaaatgtggggctcatccgagggctcatcttacgttattgctg 371
Query: 185 gcacgttccatgagcatgtggggagtcatggtagagacaccggccagaggctgacgtagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gcacgttccatgagcatgtggggagtcatggtagagacaccggccagaggctgacgtagc 431
Query: 245 cagaggctcctgccctagcttccagactctcctgccctaaaagtgggaatttacattttg 304
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cagaggctcctgcccgagcttccagactctcctgccctaaaagtgggaatttacattttg 491
Query: 305 tttctatcttcaaagtttctctaggacatgaacgatggttgcattcattatttaatcaga 364
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 492 tttctatcttcaaagtttcactaggacatgaacgatggttgcattcattatataatcaga 551
Query: 365 ggccatgacctcagtaactacc-------------tgggacagtaactgcaggtagaggt 411
|||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 552 ggccatgacctcagtaactacccaaaaaggattcctgggacagtaactgcaggtagaggt 611
Query: 412 gttcgggggtggggtgaggcagacaggacagggaacaaggcttagagaccaggaaagata 471
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ggtcgggggtggggtgaggcagacaggacagggaacaaggcttagagaccaggaaagata 671
Query: 472 gtggagctcctgaacagatgagatgttcagaatctgcaaaggtccctaaagattaaattc 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gtggagctcctgaacagatgagatgttcagaatctgcaaaggtccctaaagattaaattc 731
Query: 532 cagtgaaaagcccccaagggcaaatgtgccctgacctgccgagcttggcatgggaggttc 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 cagtgaaaagcccccaagggcaaatgtgccctgacctgccgagcttggcatgggaggttc 791
Query: 592 ctgtcttagttactgttatcatggcaaaggcaacttatagaagaaagcttttaactg 648
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 ctgtcttagttactgttatcatggcaaaggcaacttatagaagaaagcttttaactg 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_f04.g1 MSMg01no079_f04.g1 CHROMAT_FILE:
MSMg01no079_f04.g1 PHD_FILE: MSMg01no079_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:55 2005
(555 letters)
>mm_chr2_128272542_128273496
Length = 955
Score = 265 bits (137), Expect = 6e-75
Identities = 140/141 (99%)
Strand = Plus / Minus
Query: 1 tctgtggacaagatggccctgtccaccctgcccatgggccaaacagggtaccttggcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tctgtggacaagatggccctgtccaccctgcccatgggccaaacagggtaccttggcaga 282
Query: 61 atatttaaagctgagatccaacctgtactcaattccagtatttacctgcatttgcaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atatttaaagctgagatccaacctgtactcaattccagtatttacctgcatttgcaacca 222
Query: 121 tgacattgtgtaagaggagca 141
|||| ||||||||||||||||
Sbjct: 221 tgacgttgtgtaagaggagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
