Query= MSMg01no079_i09.b1 MSMg01no079_i09.b1 CHROMAT_FILE:
MSMg01no079_i09.b1 PHD_FILE: MSMg01no079_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:10 2005
(558 letters)
>mm_chr2_43870353_43871312
Length = 960
Score = 1029 bits (532), Expect = 0.0
Identities = 550/556 (98%), Gaps = 2/556 (0%)
Strand = Plus / Plus
Query: 5 gaattctgaacctactga-aagaactaaacaggcaagaataattttattttgagctacaa 63
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgaacctaatgataagaactaaacaggcaagaataattttattttgagctacaa 264
Query: 64 tgtgtgtgttctctaggtgtataaggctttaaactcccatggctttccagttcatgtggg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtgtgtgttctctaggtgtataaggctttaaactcccatggctttccagttcatgtggg 324
Query: 124 tgataacatgattttttttt-aacattgatgtttttgatggtagaacatggtactaaatc 182
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgataacatgattttttttttaacattgatgtttttgatggtagaacatggtactaaatc 384
Query: 183 tctagactgcataaaaattactttctactgtttattaagagttcttaatgtgcatatgta 242
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctagactgcataaaaactactctctactgtttattaagagttcttaatgtgcatatgta 444
Query: 243 atactaatcattgccgtagttcagtttacatccaaatgtttaaaaaggagtggcttcctt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atactaatcattgccgtagttcagtttacatccaaatgtttaaaaaggagtggcttcctt 504
Query: 303 aaaacatgcaggatgtaattaacataactgatgaacaaagcagtgtgtatgaatgccact 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaaacatgcaggatgtaattaacataactgatgaacaaagcagtgtgtatgaatgccact 564
Query: 363 tgagctgtattccaacctgtattacaattcagccaccaacatagtgcttacaggccacct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgagctgtattccaacctgtattacaattcagccaccaacatagtgcttacaggccacct 624
Query: 423 gcatatcattaggaagaatattataaagtacacagaaatagccacggattttctctaagt 482
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 625 gcatatcattaggaagaatattataaagtacacagaaatagccacggaatttctctaagt 684
Query: 483 atgtggagatgtgaatgaattgttaaataacgaagtcaatgtaaccatgttctacttaaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atgtggagatgtgaatgaattgttaaataacgaagtcaatgtaaccatgttctacttaaa 744
Query: 543 atttgatctaggtaaa 558
||||||||||||||||
Sbjct: 745 atttgatctaggtaaa 760
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 960
Length adjustment: 10
Effective length of query: 548
Effective length of database: 950
Effective search space: 520600
Effective search space used: 520600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_i09.g1 MSMg01no079_i09.g1 CHROMAT_FILE:
MSMg01no079_i09.g1 PHD_FILE: MSMg01no079_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:10 2005
(559 letters)
>mm_chr2_44065807_44066765
Length = 959
Score = 1019 bits (527), Expect = 0.0
Identities = 551/559 (98%)
Strand = Plus / Minus
Query: 1 ttaggcagtattgtagataatgaagttcttagtgaagtatgagctcatgatcacttacaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 759 ttaggcagtattgtagataatgaagttcttagtgaagtgtgagctcatgatcacttacaa 700
Query: 61 aggttttatagctataatatcatacttacagagacaaatgagtagcgctaaagcaattaa 120
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 699 aggttttatagctataatatcacacttacagagacaaatgggtagcgctaaagcaattaa 640
Query: 121 ggattatttaaaaacattcctggaactttagaaatgttttcaataaagacttttctgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ggattatttaaaaacattcctggaactttagaaatgttttcaataaagacttttctgcaa 580
Query: 181 aacaaatagataaatattaaatcattatgtttcaaacatgcatgaattgttaattactga 240
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 579 aacaaatagataaatatcaaatcattatgtttcaaacatgcatgaattgttaattagtga 520
Query: 241 aacctccattgtatggaggatcaaacagactcttctaaaacatgcagctaatgatatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aacctccattgtatggaggatcaaacagactcttctaaaacatgcagctaatgatatttc 460
Query: 301 ttttaggtacagcttaaaacaagtgctagtttataaacaagcacatatgagtaacttccc 360
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 459 ttttaggtacagcttaaaacaagtgctagtttataaataagtacatatgagtaacttccc 400
Query: 361 ttcaaaggttatgatttttgttttatgcaaacagtagtttcagaaatagttttttccaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttcaaaggttatgatttttgttttatgcaaacagtagtttcagaaatagttttttccaac 340
Query: 421 tatctgtgaatttaaaaccaattttatgtatcagtcccacagggataacaccatcctccc 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 taactgtgaatttaaaaccaattttatgtatcagtcccacagggataacaccatcctccc 280
Query: 481 acagtagagacaaggtatgcctcttaataagtaccacatttacaattgaggtgtctcttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 acagtagagacaaggtatgcctcttaataagtaccacatttacaattgaggtgtctcttc 220
Query: 541 taagacttgtctgtctcca 559
|||||||||||||||||||
Sbjct: 219 taagacttgtctgtctcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
