Query= MSMg01no079_k10.b1 MSMg01no079_k10.b1 CHROMAT_FILE:
MSMg01no079_k10.b1 PHD_FILE: MSMg01no079_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:20 2005
(537 letters)
>mm_chr2_84556788_84557721
Length = 934
Score = 733 bits (379), Expect = 0.0
Identities = 431/467 (92%), Gaps = 33/467 (7%)
Strand = Plus / Minus
Query: 71 gagagagtccaaagcagcaccttattcctacatctggaattaaaaggaaaacacagtctt 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 gagagagtccaaagcagcaccttattcctacatctggaattaaaaggaaaacacagtctt 875
Query: 131 atatttttgtgttttttaaagaaaccaaaatccagcagggcgcaatagcgaacgccttta 190
||||||||||||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 874 atatttttgtgttttttaaagaaaccaaaatccagcagggc------gcg---g----ta 828
Query: 191 atcccagcactccggaggcagaggcaggcagatttctgagtttggggccagcctggtcta 250
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 -----------------gcagaggcaggcagatttctgagtttggggccagcctggtcta 785
Query: 251 caaagtgagttccaggacagccaggagtatacagagaaaccctgtctcaaccctccccac 310
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 784 caaagtgagttccaggacagccaagagtatacagagaaaccctgtctcaaccctccccac 725
Query: 311 cctccaaaaaaaaaaaagaaaccaaaatctaaaattgccactatatcttgggacagtgat 370
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 724 cctcc---aaaaaaaaagaaaccaaaatctaaaattgtcactatatcttgggacagtgat 668
Query: 371 tatgcttctgctagtgctcatccagctaaaattaggctgacaatccagtagtctaatgtc 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tatgcttctgctagtgctcatccagctaaaattaggctgacaatccagtagtctaatgtc 608
Query: 431 cctagtgaccctgaggtattcagtacctctggttggatgatggaacgctttttccattta 490
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 607 cctagtgaccctgaggtattcagtacctctggttggatgatggaaccctttttccattta 548
Query: 491 gtatgctctggccaaaagacatgatgattcacacaggtctttgtaga 537
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gtatgctctggccaaaagacatgatgattcacacaggtctttgtaga 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 934
Length adjustment: 10
Effective length of query: 527
Effective length of database: 924
Effective search space: 486948
Effective search space used: 486948
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_k10.g1 MSMg01no079_k10.g1 CHROMAT_FILE:
MSMg01no079_k10.g1 PHD_FILE: MSMg01no079_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:20 2005
(497 letters)
>mm_chr2_84411899_84412795
Length = 897
Score = 607 bits (314), Expect = e-178
Identities = 317/318 (99%)
Strand = Plus / Plus
Query: 180 cttggacaagtccatctcttttgatggctgtgtggtccagctaatcatctttgtggtaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cttggacaagtccatctcttttgatggctgtgtggtccagctaatcatctttgtggtaca 439
Query: 240 tgtgactgttgggagcttcttgatggtctctatggccatggcccatgacccagttcatga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtgactgttgggagcttcttgatggtctctatggccatggcccatgacccagttcatga 499
Query: 300 caatttgtcagtccctctgttataatgtcatgactaaagcaacctgtcccagctgaggct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caatttgtcagtccctctgttataatgtcatgactaaagcaacctgtcccagctgaggct 559
Query: 360 gcttcccatgcatttggtgaacctaattctgctagtcagaatacgaatgtctttaccctg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gcttcccatgcatttggtgaacctaattctgctagtcagaatacgaatgtctttaccctg 619
Query: 420 cctttctgtgagcccatccaggtaccatactgtctgtgacatccactcctctccacttat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cctttctgtgagcccatccaggtaccatactgtctgtgacatccactcctctccacttat 679
Query: 480 gtcaacacggccatagca 497
||||||| ||||||||||
Sbjct: 680 gtcaacatggccatagca 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
