Query= MSMg01no080_p24.b1 MSMg01no080_p24.b1 CHROMAT_FILE:
MSMg01no080_p24.b1 PHD_FILE: MSMg01no080_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:04 2005
(635 letters)
>mm_chr2_102207905_102208942
Length = 1038
Score = 1162 bits (601), Expect = 0.0
Identities = 625/633 (98%), Gaps = 3/633 (0%)
Strand = Plus / Minus
Query: 6 gaattctctggtgcc-acctaaaagaaagagcagttatggttcatttaagagtc-cacca 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 838 gaattctctggtgccaagttaaaagaaagagcagttatggttcatttaagagtcacacca 779
Query: 64 cttgtagccccactttaaaataaatgccaggaagattctttattctccctctactccctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 cttgtagccccactttaaaataaatgccaggaagattctttattctccctctactccctc 719
Query: 124 ttatttcccctgaatctttagcctttcactatactcttttttattggggccctcaagtca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ttatttcccctgaatctttagcctttcactatactcttttttattggggccctcaagtca 659
Query: 184 taatgaacttctgcatacattgactataggcagtttaaaatagggggcaatgatttttga 243
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 658 taatgaacttctgcatacattgattataggcagtttaaaatagggggcaatgatttttga 599
Query: 244 gttactaggtgagctagagtattgttagaaaataaagggacagagcattaaatagcttaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gttactaggtgagctagagtattgttagaaaataaagggacagagcattaaatagcttaa 539
Query: 304 taaaactaattcactgtgatgtctgcccttgctcctttctacactgacagaagacttgat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 taaaactaattcactgtgatgtctgcccttgctcctttctacactgacagaagacttgat 479
Query: 364 -atctactctgctggctgcttgcaggggctgattacacagctaatagggagaggggagct 422
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 478 aatctactctgctggctgcttgcaggggctgattacacggctaatagggagaggggagct 419
Query: 423 gagctgcccagtttttccatagcagtcacgcttcatgtttggagtgcaggattgtatttg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gagctgcccagtttttccatagcagtcacgcttcatgtttggagtgcaggattgtatttg 359
Query: 483 acatttaatttaggagcctgggaacctagatagaaaactctataatgacagtggtgataa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 acatttaatttaggagcctgggaacctagatagaaaactctataatgacagtggtgataa 299
Query: 543 aatcagctagacttttatttaagagcctgcatcccctactcttccttctcttttcctgat 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aatcagctagacttttatttaagagcctgcatcccctactcttccttctcttttcctgat 239
Query: 603 aaggcaaacctttcaagaaataaaattatagta 635
|||| ||||||||||||||||||||||||||||
Sbjct: 238 aaggtaaacctttcaagaaataaaattatagta 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1038
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1028
Effective search space: 642500
Effective search space used: 642500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_p24.g1 MSMg01no080_p24.g1 CHROMAT_FILE:
MSMg01no080_p24.g1 PHD_FILE: MSMg01no080_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:04 2005
(416 letters)
>mm_chr2_102068387_102069202
Length = 816
Score = 768 bits (397), Expect = 0.0
Identities = 409/413 (99%)
Strand = Plus / Plus
Query: 1 aaggctgtcccctcagttttcgtttaggcatctggccagggccctgtggattttctggat 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 aaggctgtcccctcagttttcgtttaggcatctggccagggcccggtggattttctggat 260
Query: 61 ttggcaaacacacgtgggaagccaagagtctcaagaggatggtgggaacaggagggagct 120
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 ttgacaaacacacgtgggaagccaagagtctcgagaggatggtgggaacaggagggagct 320
Query: 121 gggtgctgtggaaaaggaggctgtgaaatccacaccagccacttcctgtgggacccaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggtgctgtggaaaaggaggctgtgaaatccacaccagccacttcctgtgggacccaagc 380
Query: 181 aaatcttgtaagctccccaggtctcacttttgctatctttaaaaagaggaggccttgatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatcttgtaagctccccaggtctcacttttgctatctttaaaaagaggaggccttgatc 440
Query: 241 tattcttggctgggttatatttgggattaagtgaaataacatctgctcaaatagcatcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattcttggctgggttatatttgggattaagtgaaataacatctgctcaaatagcatcag 500
Query: 301 gaagtgaaccctcatttgagcccagggccttttttcctatagggaagtatctgcctgaat 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagtgaaccttcatttgagcccagggccttttttcctatagggaagtatctgcctgaat 560
Query: 361 tgctcagtggcttggtttcttcattcacagagctgggatgatcatactgagtg 413
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgctcagtggcttggtttcttcattcacagagctgggatgatcatactgagtg 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
