Query= MSMg01no081_o20.b1 MSMg01no081_o20.b1 CHROMAT_FILE:
MSMg01no081_o20.b1 PHD_FILE: MSMg01no081_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:17 2005
(566 letters)
>mm_chr2_115439234_115440199
Length = 966
Score = 1081 bits (559), Expect = 0.0
Identities = 565/567 (99%), Gaps = 2/567 (0%)
Strand = Plus / Minus
Query: 1 atgtctactcaggactacatactgccatgatggttaatgataatgaatatagtaacatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 atgtctactcaggactacatactgccatgatggttaatgataatgaatatagtaacatgg 707
Query: 61 gtagagttcattaggaatcaggctcccttcacttagccatcactgtgataataaaaatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gtagagttcattaggaatcaggctcccttcacttagccatcactgtgataataaaaatag 647
Query: 121 tgccattatttaagaaattgagaaggagtcaagtatttgatccaaatgta-cacagtcaa 179
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 646 tgccattatttaagaaattgagaaggagtcaagtatttgatccaaatg-agcacagtcaa 588
Query: 180 aatgtaagcaagcagcttggctttgggctctaagctcttaatcactgcctccaaatgaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 aatgtaagcaagcagcttggctttgggctctaagctcttaatcactgcctccaaatgaca 528
Query: 240 aatcactttccacaaccagtacaccaatatatcacaggactgcagttgcagaggagtcct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aatcactttccacaaccagtacaccaatatatcacaggactgcagttgcagaggagtcct 468
Query: 300 taaatctcttcaatccagtttcagcaaaagagtatttactaagaatagaaagcttgtgat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 taaatctcttcaatccagtttcagcaaaagagtatttactaagaatagaaagcttgtgat 408
Query: 360 agttcctaaaggagcagaacacaggtttcagagactttattaccaaaatgccaggtcaca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 agttcctaaaggagcagaacacaggtttcagagactttattaccaaaatgccaggtcaca 348
Query: 420 cgaacgctcccttaggcctccagatgcagtagcctccagagtcctgacgagagttctaag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 cgaacgctcccttaggcctccagatgcagtagcctccagagtcctgacgagagttctaag 288
Query: 480 ccttacagctccccatcccaaatggaactttcaagggatagatcctacacacaagggcat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ccttacagctccccatcccaaatggaactttcaagggatagatcctacacacaagggcat 228
Query: 540 ttcaccattcaaatccaccacttgaaa 566
|||||||||||||||||||||||||||
Sbjct: 227 ttcaccattcaaatccaccacttgaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_o20.g1 MSMg01no081_o20.g1 CHROMAT_FILE:
MSMg01no081_o20.g1 PHD_FILE: MSMg01no081_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:17 2005
(589 letters)
>mm_chr2_115327127_115328115
Length = 989
Score = 1108 bits (573), Expect = 0.0
Identities = 585/589 (99%), Gaps = 1/589 (0%)
Strand = Plus / Plus
Query: 1 cttcagggtacgtaatgatttttttttcctcaacaatagaagcaaataaataaacaaata 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 202 cttcagggtacgtaatgatttttttt-cctcaacaatagaagcaaataaataaacaaata 260
Query: 61 aataaataaataaaatggatttagctcaaggctttgcaaaagggtatttgcctttacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataaataaataaaatggatttagctcaaggctttgcaaaagggtatttgcctttacatt 320
Query: 121 aatatcagacggccgtattcttgagaaagttttacacaacaacctaaggatctatgtata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatatcagacggccgtattcttgagaaagttttacacaacaacctaaggatctatgtata 380
Query: 181 ataagaattcctaagccagtggaaccaaagtttgaagtaggggatgtcatgctttgcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataagaattcctaagccagtggaaccaaagtttgaagtaggggatgtcatgctttgcttc 440
Query: 241 tattaaagagaaaggggaagtatgatcatatagtcatgggcacagagtgtagtaagacac 300
|||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 441 tattaaagagaagggggaagtatgatcatatagtcatgggcacagagtgcagtacgacac 500
Query: 301 ctataaaaagttcctggggagcttcagaacttcatttaaagcagtggaagggcatcctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctataaaaagttcctggggagcttcagaacttcatttaaagcagtggaagggcatcctgt 560
Query: 361 ctcatatcaaattgtcgtatacatctgctatatgtggttcacattataagtccaaggaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcatatcaaattgtcgtatacatctgctatatgtggttcacattataagtccaaggaga 620
Query: 421 cagaaactatgcacataaaaggatgccaccatgggaaatcacaatgctccagccttagcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagaaactatgcacataaaaggatgccaccatgggaaatcacaatgctccagccttagcg 680
Query: 481 tgtgcgacattgaaggcatcttaatcttgacatttttgctgagactactatcaaagctaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtgcgacattgaaggcatcttaatcttgacatttttgctgagactactatcaaagctaa 740
Query: 541 ctgaacattttgttgttgaaatgctctcgttagatatgatttataaggc 589
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgaacattttgttgttgaaatgctctcgttagatatgatttataaggc 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
