Query= MSMg01no082_p03.b1 MSMg01no082_p03.b1 CHROMAT_FILE:
MSMg01no082_p03.b1 PHD_FILE: MSMg01no082_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:32 2005
(526 letters)
>mm_chr2_122400860_122401784
Length = 925
Score = 994 bits (514), Expect = 0.0
Identities = 520/522 (99%), Gaps = 1/522 (0%)
Strand = Plus / Minus
Query: 5 gaattcacactcctgcctctgggtaaagctattttgataagctaaaatctcagagtactg 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gaattcacactcctgcttctgggtaaagctattttgataagctaaaatctcagagtactg 666
Query: 65 ccattcatgtaaaggcagcagccaacgatggggagacacgctgccaaggtcagtgtgtcg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ccattcatgtaaaggcagcagccaacgatggggagacacgctgccaaggtcagtgtgtcg 606
Query: 125 ctggcagcagaaaatgcaactcagcagtgtccactgccaacgctgcagcccgaagagtcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ctggcagcagaaaatgcaactcagcagtgtccactgccaacgctgcagcccgaagagtcc 546
Query: 185 cttggagcctcccggggcctctgctcaggtccttgacttccaccacaggaggagatcctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cttggagcctcccggggcctctgctcaggtccttgacttccaccacaggaggagatcctg 486
Query: 245 gatgagtcagcggataaaagttagtgagcttgtccactaagcagaaagatctggctcact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gatgagtcagcggataaaagttagtgagcttgtccactaagcagaaagatctggctcact 426
Query: 305 tcatgagagtcaagcgtgggggttaggagaggaggagcgagcattcctaattgcctgggc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tcatgagagtcaagcgtgggggttaggagaggaggagcgagcattcctaattgcctgggc 366
Query: 365 agtaactacataagcgatttgggggctcttaattaatctgcaactaaatttccatattgg 424
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 365 agtaactacataagcgattt-ggggctcttaattaatctgcaactaaatttccatattgg 307
Query: 425 ggaaatcacattctgccattccacttttccatatatttggaactatatccatgacgatga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ggaaatcacattctgccattccacttttccatatatttggaactatatccatgacgatga 247
Query: 485 ggctttaaattgattttagctggagaaggacaagctgtagag 526
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ggctttaaattgattttagctggagaaggacaagctgtagag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 925
Length adjustment: 10
Effective length of query: 516
Effective length of database: 915
Effective search space: 472140
Effective search space used: 472140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_p03.g1 MSMg01no082_p03.g1 CHROMAT_FILE:
MSMg01no082_p03.g1 PHD_FILE: MSMg01no082_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:32 2005
(474 letters)
>mm_chr2_122253938_122254811
Length = 874
Score = 917 bits (474), Expect = 0.0
Identities = 474/474 (100%)
Strand = Plus / Plus
Query: 1 tttatttaatatatgtgagtgcactgtcgctgtcttcagacacaacagaagatggcatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttatttaatatatgtgagtgcactgtcgctgtcttcagacacaacagaagatggcatca 260
Query: 61 gatcccattacagatggttgtttgtcaccatgtgttttctgggaattgaactcaggacgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatcccattacagatggttgtttgtcaccatgtgttttctgggaattgaactcaggacgt 320
Query: 121 ttggaagagtaatcagtgttcttaaccactgagccatctctccagcccatgcttgcactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggaagagtaatcagtgttcttaaccactgagccatctctccagcccatgcttgcactc 380
Query: 181 tttaaattctagttgagctttccatttcccactcaggcttaatgtcctctccttctgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaaattctagttgagctttccatttcccactcaggcttaatgtcctctccttctgaag 440
Query: 241 atgctgtgcttgtcatccactgcgatagatgtgggacttaagccctcattctcctgtttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgctgtgcttgtcatccactgcgatagatgtgggacttaagccctcattctcctgtttc 500
Query: 301 cctgttattcaaatagcacctataattttccttgcaaaagaaataaacccaggggcacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgttattcaaatagcacctataattttccttgcaaaagaaataaacccaggggcacag 560
Query: 361 cctgaaatgggcatgaggcatagtcatgagatagaatcacttttcttggaaaactccact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctgaaatgggcatgaggcatagtcatgagatagaatcacttttcttggaaaactccact 620
Query: 421 gcctgtcagaacaaatgctacctccaacttgaggagagatgagttctggaggaa 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcctgtcagaacaaatgctacctccaacttgaggagagatgagttctggaggaa 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
