Query= MSMg01no084_c23.b1 MSMg01no084_c23.b1 CHROMAT_FILE:
MSMg01no084_c23.b1 PHD_FILE: MSMg01no084_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:09 2005
(312 letters)
>mm_chr2_167716787_167717499
Length = 713
Score = 497 bits (257), Expect = e-145
Identities = 278/285 (97%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 6 gaattc-actctggctccgcttcacacacaaggacagatcagtggcctgcgaggcaagga 64
|||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 490 gaattcaactctggctctgcttcacacacaaggacagaccagtggcctgcgaggcaagga 431
Query: 65 tgggcgccaggcaccatggtgataacagagggtggaagctcagagaggttcggaacctgc 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tgggcgccagacaccatggtgataacagagggtggaagctcagagaggttcggaacctgc 371
Query: 125 ccacccagcttcagtgtctgtgcccctgaccactatgccccgtatccagcagagaaacac 184
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 370 ccacccagcttcagtgtctgcgcccctgaccactatgccccgtggccagcagagaaacac 311
Query: 185 gcagcattcattcatgcctctcactttaatcacctcctccactcatacaaaacacaccct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcagcattcattcatgcctctcactttaatcacctcctccactcatacaaaacacaccct 251
Query: 245 tattgttagtcttcttttctttttacatctgtttattgtgtatgt 289
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tattgttagtcttcttttctttttacatctgtttattgtgtatgt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 713
Length adjustment: 9
Effective length of query: 303
Effective length of database: 704
Effective search space: 213312
Effective search space used: 213312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_c23.g1 MSMg01no084_c23.g1 CHROMAT_FILE:
MSMg01no084_c23.g1 PHD_FILE: MSMg01no084_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:09 2005
(194 letters)
>mm_chr2_167590344_167590937
Length = 594
Score = 373 bits (193), Expect = e-108
Identities = 193/193 (100%)
Strand = Plus / Plus
Query: 1 caggtctgagccctggccccgctgtgcgacctctggctagggccttgccttctccgatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggtctgagccctggccccgctgtgcgacctctggctagggccttgccttctccgatca 260
Query: 61 ggccttgctttcccttctcatctgtcgtgcctggaccaggctggcctgggaggtgccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggccttgctttcccttctcatctgtcgtgcctggaccaggctggcctgggaggtgccagc 320
Query: 121 ttcaagcagggccaggggctgctgctctgtccccttggccgccagcccccgcctccagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcaagcagggccaggggctgctgctctgtccccttggccgccagcccccgcctccagcc 380
Query: 181 tccagagctccag 193
|||||||||||||
Sbjct: 381 tccagagctccag 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
