Query= MSMg01no084_i14.b1 MSMg01no084_i14.b1 CHROMAT_FILE:
MSMg01no084_i14.b1 PHD_FILE: MSMg01no084_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:35 2005
(346 letters)
>mm_chr2_162186378_162187123
Length = 746
Score = 470 bits (243), Expect = e-137
Identities = 306/337 (90%), Gaps = 18/337 (5%)
Strand = Plus / Minus
Query: 6 cttgcctcctgagtggtgggattgat------tgtcaccatgtctacatgttttatgctc 59
||||||||||||||| |||||||||| |||||||||||| ||||||||| |||||
Sbjct: 733 cttgcctcctgagtgctgggattgattgtgcatgtcaccatgtccacatgttttgtgctc 674
Query: 60 tgttggccagattgaacaaatgtgggtcttatagtgcatgtatgtgtgtgcatatatgta 119
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 673 tgttggccagattgaacaaatgtggctcttatagtgcatgtatgtgtgtgcatatatgta 614
Query: 120 tgcatgtgtgtattagtatggatgcaaccatgtg----------tgtgtgtgtatacat- 168
||||||| |||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 613 tgcatgtttgtattggtatggatgcaaccatgtgtgtatgcatttgtgtgtgtatacata 554
Query: 169 -atatatatatgtatataaatacatatatgtttacatttgtatgaatttgtttgtatttg 227
||| |||||||||||||||||||||||||||||||| |||||| |||||||||| ||||
Sbjct: 553 catacatatatgtatataaatacatatatgtttacatctgtatggatttgtttgtgtttg 494
Query: 228 tgtgtgtattcatgcacatatcatatgtgttcatttgtagctcactcaaaatcatgtaat 287
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tgtgtgtattcaggcacatatcatatgtgttcatttgtagctcactcaaaatcatgtaat 434
Query: 288 gtcttgtggacccaacatctccaaaatcctttttttt 324
||||||||||| |||||||||||||||| ||||||||
Sbjct: 433 gtcttgtggactcaacatctccaaaatcatttttttt 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_i14.g1 MSMg01no084_i14.g1 CHROMAT_FILE:
MSMg01no084_i14.g1 PHD_FILE: MSMg01no084_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:35 2005
(484 letters)
>mm_chr2_162038020_162038903
Length = 884
Score = 928 bits (480), Expect = 0.0
Identities = 483/484 (99%)
Strand = Plus / Plus
Query: 1 ccactgcatgctgacactttgcttcctcttgtgaagataaaagaaaaagaaccaaaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 ccactgcatgctgacactttgcttcctcttgtgaagataaaagaaaaagaaacaaaagac 260
Query: 61 ttcagagcatgggggtggtaggagcccaggacgcctctctgcattcatggcctctatagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcagagcatgggggtggtaggagcccaggacgcctctctgcattcatggcctctatagc 320
Query: 121 cctcttgctggtgccctcttgatgctgggccctgggtctttctctgagaagatgcaggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctcttgctggtgccctcttgatgctgggccctgggtctttctctgagaagatgcaggtc 380
Query: 181 ggctggagttggctggggagctcattagcacctcaccagagccaagggctgcctgctttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctggagttggctggggagctcattagcacctcaccagagccaagggctgcctgctttc 440
Query: 241 cagaaggcattttgaactctcactttggttgcttttttgaaatcaatacaatatattttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagaaggcattttgaactctcactttggttgcttttttgaaatcaatacaatatattttt 500
Query: 301 tttcctgtggctccatcagctgcccttgctgccaatggaggctgctgacttctaaggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttcctgtggctccatcagctgcccttgctgccaatggaggctgctgacttctaaggaaa 560
Query: 361 accttctgggtttatcaacacacaggtcttcacttcacaagcaacactattatattcttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accttctgggtttatcaacacacaggtcttcacttcacaagcaacactattatattcttc 620
Query: 421 cacatggtcctctgtgttctctctctctctctctctctctctctctctctctctctctct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacatggtcctctgtgttctctctctctctctctctctctctctctctctctctctctct 680
Query: 481 ctct 484
||||
Sbjct: 681 ctct 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
