Query= MSMg01no084_k08.b1 MSMg01no084_k08.b1 CHROMAT_FILE:
MSMg01no084_k08.b1 PHD_FILE: MSMg01no084_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:43 2005
(256 letters)
>mm_chr2_42443585_42444240
Length = 656
Score = 472 bits (244), Expect = e-137
Identities = 253/256 (98%)
Strand = Plus / Minus
Query: 1 aggaaagatcccagttctaatctttaatcaaaagagttatactggcttggtatctaccag 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aggaaagatcccagttctaagctttaatcaaaagagttatactggcttggtatctaccag 397
Query: 61 aggagaagggtttataattgtgaaattctcttttggcctctttggcctaagctgctcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aggagaagggtttataattgtgaaattctcttttggcctctttggcctaagctgctcttt 337
Query: 121 tccatagaatgacttcctcaagctaggggacaattatactggaaactatagaccagatta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 336 tccatagaatgacttcctcaagctaggggacaattatactggaaactatagaacagatta 277
Query: 181 atattgttaacatataccctttacccaaagttcacgtaactaagtgcaattgacattgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atattgttaacatataccctttacccaaagttcacgtaactaagtgcaattgacattgtg 217
Query: 241 ttttcatcttagccta 256
|| |||||||||||||
Sbjct: 216 ttgtcatcttagccta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 256
Length of database: 656
Length adjustment: 9
Effective length of query: 247
Effective length of database: 647
Effective search space: 159809
Effective search space used: 159809
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no084_k08.g1 MSMg01no084_k08.g1 CHROMAT_FILE:
MSMg01no084_k08.g1 PHD_FILE: MSMg01no084_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:44 2005
(295 letters)
>mm_chr2_42296753_42297453
Length = 701
Score = 532 bits (275), Expect = e-155
Identities = 292/301 (97%), Gaps = 6/301 (1%)
Strand = Plus / Plus
Query: 1 ttcagagatacaaatctgtcttgtgtctaagacacaatcaggagttcaactgcgatacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcagagatacaaatctgtcttgtgtctaagacacaatcaggagttcaactgcgatacta 260
Query: 61 aaggcccctcaaatttctacttatgcacaccatactgccgctttttcccagaaaatgttg 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggcccctcaaatttctacttaggcacaccatactgccgctttttcccagaaaatgttg 320
Query: 121 aacgaaataatatacatgaagatacatacaatcacagtcaccaatgcatctcacagatat 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgaaataatatacatgaagatacatacaatcacagtcaccaatgcatctcacagatat 380
Query: 181 ttgcactgtttgtttaacactagtattagtacattttatttcattttcaattggataagt 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 ttgcactgtttgtttaacactagtattattacattttatttcattttcaattggataagt 440
Query: 241 cagttagtgcgaatgt------ctactgatcaaaagtttattcaaatcatggctttacat 294
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagttagtgcgaatgtatatgcctactgatcaaaagtttattcaaatcatggctttacat 500
Query: 295 a 295
|
Sbjct: 501 a 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 701
Length adjustment: 9
Effective length of query: 286
Effective length of database: 692
Effective search space: 197912
Effective search space used: 197912
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
