MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-085E20
Chromosome	2 (Build37)
Map Location	131,900,757 - 131,900,902
singlet/doublet	singlet
Overlap gene	Slc23a2
Upstream gene	Siglec1, LOC100043457, Hspa12b, 1700037H04Rik, Spef1, Cenpb, Cdc25b, 2310035K24Rik, D430028G21Rik, Pank2, Rnf24, LOC100043463, Smox, Adra1d, Lamr1-ps1, Prnp, Prnd, Rassf2
Downstream gene	LOC626513, LOC100043470, EG329521, 5730494N06Rik, Pcna, Cds2, Prokr2, 1700026D11Rik, Prei4, LOC100043781, LOC383801, LOC668906, Chgb, 3300001M20Rik, Mcm8, Crls1, B430119L13Rik, 5830467P10Rik, LOC668908
Link	Open Mouse BAC browser

Click to get alignment info.

name	Siglec1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20612 MGI:99668
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043457 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043457
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Hspa12b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72630 MGI:1919880
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700037H04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67326 MGI:1914576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spef1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70997 MGI:3513546
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cenpb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12616 MGI:88376
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdc25b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12531 MGI:99701
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310035K24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69596 MGI:1916846
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D430028G21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228607 MGI:2444773
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pank2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74450 MGI:1921700
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:51902 MGI:1261771
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043463 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043463
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Smox (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228608 MGI:2445356
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adra1d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11550 MGI:106673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lamr1-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:79234 MGI:1930596
definition	gene_synonym : 67kDa note : laminin receptor 1 (ribosomal protein SA), pseudogene 1 pseudo : _no_value

name	Prnp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19122 MGI:97769
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prnd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26434 MGI:1346999
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rassf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215653 MGI:2442060
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc23a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54338 MGI:1859682
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC626513 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626513
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 22 Proteins pseudo : _no_value

name	LOC100043470 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043470
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG329521 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329521 MGI:3644445
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 ESTs, 9 Proteins

name	5730494N06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70612 MGI:1917862
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pcna (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18538 MGI:97503
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cds2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110911 MGI:1332236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prokr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246313 MGI:2181363
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700026D11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70371 MGI:1917621
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Prei4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74182 MGI:104898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC100043781 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	LOC383801 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383801
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC668906 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668906
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Chgb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12653 MGI:88395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3300001M20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66926 MGI:1914176
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mcm8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66634 MGI:1913884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crls1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66586 MGI:1913836
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	B430119L13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320974 MGI:2445154
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5830467P10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241639 MGI:2443583
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668908 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668908
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Siglec1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117938285 GeneID:20612 MGI:99668
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sialic acid binding Ig-like lectin 1, sialoadhesin transcript_id : NM_011426.2

name	LOC100043457 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250013 GeneID:100043457
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043457 transcript_id : XM_001480206.1

name	Hspa12b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130472 GeneID:72630 MGI:1919880
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 12B transcript_id : NM_028306.3

name	1700037H04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801935 GeneID:67326 MGI:1914576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700037H04 gene transcript_id : NM_026091.2

name	Spef1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114687765 GeneID:70997 MGI:3513546
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm flagellar 1 transcript_id : NM_027641.2

name	Cenpb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328104 GeneID:12616 MGI:88376
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centromere protein B transcript_id : NM_007682.2

name	Cdc25b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12963486 GeneID:12531 MGI:99701
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell division cycle 25 homolog B (S. pombe) transcript_id : NM_023117.1

name	2310035K24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980818 GeneID:69596 MGI:1916846
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310035K24 gene transcript_id : NM_027129.2

name	D430028G21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450262 GeneID:228607 MGI:2444773
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D430028G21 gene transcript_id : NM_144888.1

name	Pank2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23943833 GeneID:74450 MGI:1921700
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pantothenate kinase 2 (Hallervorden-Spatz syndrome) transcript_id : NM_153501.1

name	Rnf24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130609 GeneID:51902 MGI:1261771
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 24 transcript_id : NM_178607.3

name	Smox (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704049 GeneID:228608 MGI:2445356
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermine oxidase transcript_id : NM_145533.1

name	Adra1d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347546 GeneID:11550 MGI:106673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adrenergic receptor, alpha 1d transcript_id : NM_013460.4

name	Prnp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13173472 GeneID:19122 MGI:97769
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prion protein transcript_id : NM_011170.1

name	Prnd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13605923 GeneID:26434 MGI:1346999
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prion protein dublet transcript_id : NM_023043.1

name	Rassf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254305 GeneID:215653 MGI:2442060
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ras association (RalGDS/AF-6) domain family 2 transcript_id : NM_175445.3

name	Slc23a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42741687 GeneID:54338 MGI:1859682
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 23 (nucleobase transporters), member 2 transcript_id : NM_018824.2

name	EG329521 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94367260 GeneID:329521 MGI:3644445
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 ESTs, 9 Proteins product : predicted gene, EG329521 transcript_id : XM_194054.6

name	5730494N06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357407 GeneID:70612 MGI:1917862
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730494N06 gene transcript_id : NM_027478.2

name	Pcna (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130232 GeneID:18538 MGI:97503
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proliferating cell nuclear antigen transcript_id : NM_011045.2

name	Cds2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343990 GeneID:110911 MGI:1332236
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 transcript_id : NM_138651.4

name	Prokr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542916 GeneID:246313 MGI:2181363
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prokineticin receptor 2 transcript_id : NM_144944.2

name	1700026D11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250161 GeneID:70371 MGI:1917621
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700026D11 gene transcript_id : XM_001480981.1

name	Prei4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185941 GeneID:74182 MGI:104898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : preimplantation protein 4 transcript_id : NM_028802.2

name	Prei4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185944 GeneID:74182 MGI:104898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : preimplantation protein 4 transcript_id : NM_001042671.1

name	Prei4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185946 GeneID:74182 MGI:104898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : preimplantation protein 4 transcript_id : NM_001042672.1

name	LOC100043781 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250163 GeneID:100043781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100043781 transcript_id : XM_001480983.1

name	Chgb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381812 GeneID:12653 MGI:88395
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromogranin B transcript_id : NM_007694.3

name	3300001M20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364433 GeneID:66926 MGI:1914176
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3300001M20 gene transcript_id : NM_175113.2

name	Mcm8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130297 GeneID:66634 MGI:1913884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : minichromosome maintenance deficient 8 (S. cerevisiae) transcript_id : NM_025676.3

name	Crls1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66932979 GeneID:66586 MGI:1913836
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cardiolipin synthase 1 transcript_id : NM_001024385.1

name	Crls1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66932976 GeneID:66586 MGI:1913836
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cardiolipin synthase 1 transcript_id : NM_025646.3

name	B430119L13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802321 GeneID:320974 MGI:2445154
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B430119L13 gene transcript_id : NM_177303.4

name	5830467P10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487314 GeneID:241639 MGI:2443583
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5830467P10 gene transcript_id : NM_198029.2

name	Siglec1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117938286 CCDS:CCDS16754.1 GeneID:20612 MGI:99668
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005529 - sugar binding [Evidence ISS] [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0016337 - cell-cell adhesion [Evidence ISS]; GO:0007160 - cell-matrix adhesion [Evidence ISS]; GO:0006954 - inflammatory response [Evidence ISS] codon_start : 1 product : sialoadhesin protein_id : NP_035556.2

name	LOC100043457 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250014 GeneID:100043457
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480256.1

name	Hspa12b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312236 CCDS:CCDS16755.1 GeneID:72630 MGI:1919880
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : HSPA12B protein_id : NP_082582.1

name	1700037H04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385590 CCDS:CCDS16756.1 GeneID:67326 MGI:1914576
definition	codon_start : 1 product : hypothetical protein LOC67326 protein_id : NP_080367.1

name	Spef1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625792 GeneID:70997 MGI:3513546
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0019861 - flagellum [Evidence IEA]; GO:0009434 - flagellum (sensu Eukaryota) [Evidence IDA] codon_start : 1 note : calponin-homology and microtubule-associated protein product : sperm flagellar 1 protein_id : NP_081917.1

name	Cenpb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328105 CCDS:CCDS16757.1 GeneID:12616 MGI:88376
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000775 - chromosome, pericentric region [Evidence IEA] [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 product : centromere autoantigen B protein_id : NP_031708.2

name	Cdc25b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963487 CCDS:CCDS16758.1 GeneID:12531 MGI:99701
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007144 - female meiosis I [Evidence IMP]; GO:0000087 - M phase of mitotic cell cycle [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0001556 - oocyte maturation [Evidence IMP]; GO:0045860 - positive regulation of protein kinase activity [Evidence IMP]; GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 note : cell division cycle 25B product : cell division cycle 25 homolog B protein_id : NP_075606.1

name	2310035K24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980819 CCDS:CCDS16759.1 GeneID:69596 MGI:1916846
definition	codon_start : 1 product : hypothetical protein LOC69596 protein_id : NP_081405.2

name	D430028G21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450263 CCDS:CCDS16760.1 GeneID:228607 MGI:2444773
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0009615 - response to virus [Evidence IEA] codon_start : 1 note : mitochondrial anti-viral signaling protein product : virus-induced signaling adapter protein_id : NP_659137.1

name	Pank2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51571537 CCDS:CCDS16761.1 GeneID:74450 MGI:1921700
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004594 - pantothenate kinase activity [Evidence IGI] GO_process : GO:0015937 - coenzyme A biosynthesis [Evidence IEA] codon_start : 1 product : pantothenate kinase 2 protein_id : NP_705721.2

name	Rnf24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519929 CCDS:CCDS16762.1 GeneID:51902 MGI:1261771
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : ring finger protein 24 protein_id : NP_848722.1

name	Smox (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704050 CCDS:CCDS16763.1 GeneID:228608 MGI:2445356
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0046592 - polyamine oxidase activity [Evidence IDA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0046208 - spermine catabolism [Evidence IDA] codon_start : 1 note : polyamine oxidase 1 product : spermine oxidase protein_id : NP_663508.1

name	Adra1d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347547 CCDS:CCDS16764.1 GeneID:11550 MGI:106673
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004935 - adrenoceptor activity [Evidence IEA]; GO:0004937 - alpha1-adrenergic receptor activity [Evidence IDA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0001986 - decreased strength of heart contraction during baroreceptor response to increased blood pressure [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0001994 - norepinephrine-epinephrine vasoconstriction during regulation of blood pressure [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : adrenergic receptor, alpha 1d protein_id : NP_038488.4

name	Prnp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13173473 CCDS:CCDS16766.1 GeneID:19122 MGI:97769
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0045121 - lipid raft [Evidence TAS] [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005507 - copper ion binding [Evidence IDA]; GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006878 - copper ion homeostasis [Evidence TAS]; GO:0006139 - nucleobase, nucleoside, nucleotide and nucleic acid metabolism [Evidence TAS]; GO:0006979 - response to oxidative stress [Evidence IDA] codon_start : 1 product : prion protein protein_id : NP_035300.1

name	Prnd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13605924 CCDS:CCDS16767.1 GeneID:26434 MGI:1346999
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005507 - copper ion binding [Evidence IDA]; GO:0048503 - GPI anchor binding [Evidence IEA] GO_process : GO:0006878 - copper ion homeostasis [Evidence IDA] codon_start : 1 note : prion protein-like protein product : prion protein dublet protein_id : NP_075530.1

name	Rassf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425302 CCDS:CCDS16768.1 GeneID:215653 MGI:2442060
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : Ras association (RalGDS/AF-6) domain family 2 protein_id : NP_780654.1

name	Slc23a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42741688 CCDS:CCDS16769.1 GeneID:54338 MGI:1859682
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008520 - L-ascorbate:sodium symporter activity [Evidence IMP] [Evidence ISS]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0008523 - sodium-dependent multivitamin transporter activity [Evidence ISS]; GO:0015293 - symporter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0019852 - L-ascorbic acid metabolism [Evidence ISS] [Evidence IMP]; GO:0015993 - molecular hydrogen transport [Evidence ISS]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : sodium-dependent vitamin C transporter; solute carrier family 23 (nucleobase transporters), member 1 product : solute carrier family 23 (nucleobase transporters), member 2 protein_id : NP_061294.2

name	EG329521 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82886998 GeneID:329521 MGI:3644445
definition	codon_start : 1 product : hypothetical protein protein_id : XP_194054.4

name	5730494N06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312612 CCDS:CCDS16770.1 GeneID:70612 MGI:1917862
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC70612 protein_id : NP_081754.1

name	Pcna (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7242171 CCDS:CCDS16771.1 GeneID:18538 MGI:97503
definition	GO_component : GO:0000307 - cyclin-dependent protein kinase holoenzyme complex [Evidence IPI]; GO:0005652 - nuclear lamina [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0043626 - PCNA complex [Evidence IEA]; GO:0005657 - replication fork [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030337 - DNA polymerase processivity factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006287 - base-excision repair, gap-filling [Evidence IDA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IMP]; GO:0006275 - regulation of DNA replication [Evidence IEA] codon_start : 1 product : proliferating cell nuclear antigen protein_id : NP_035175.1

name	Cds2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20149726 CCDS:CCDS16772.1 GeneID:110911 MGI:1332236
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : phosphatidate cytidylyltransferase 2 protein_id : NP_619592.1

name	Prokr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542917 CCDS:CCDS16773.1 GeneID:246313 MGI:2181363
definition	GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007623 - circadian rhythm [Evidence IDA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : G protein-coupled receptor 73-like 1 product : prokineticin receptor 2 protein_id : NP_659193.2

name	1700026D11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250162 GeneID:70371 MGI:1917621
definition	codon_start : 1 product : hypothetical protein LOC70371 protein_id : XP_001481031.1

name	Prei4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185945 GeneID:74182 MGI:104898
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 3 product : preimplantation protein 4 isoform 2 protein_id : NP_001036136.1

name	Prei4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185942 GeneID:74182 MGI:104898
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : preimplantation protein 4 isoform 2 protein_id : NP_083078.3

name	Prei4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185947 GeneID:74182 MGI:104898
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 4 product : preimplantation protein 4 isoform 3 protein_id : NP_001036137.1

name	LOC100043781 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250164 GeneID:100043781
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481033.1

name	Chgb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680934 CCDS:CCDS16777.1 GeneID:12653 MGI:88395
definition	codon_start : 1 note : secretogranin I product : chromogranin B protein_id : NP_031720.1

name	3300001M20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28201985 GeneID:66926 MGI:1914176
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0006446 - regulation of translational initiation [Evidence IEA]; GO:0008033 - tRNA processing [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66926 protein_id : NP_780322.1

name	Mcm8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542008 CCDS:CCDS16778.1 GeneID:66634 MGI:1913884
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0008094 - DNA-dependent ATPase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : minichromosome maintenance deficient 8 protein_id : NP_079952.2

name	Crls1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66932980 CCDS:CCDS16779.1 GeneID:66586 MGI:1913836
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008654 - phospholipid biosynthesis [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : cardiolipin synthase 1 isoform 1 protein_id : NP_001019556.1

name	Crls1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754128 GeneID:66586 MGI:1913836
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008654 - phospholipid biosynthesis [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : cardiolipin synthase 1 isoform 2 protein_id : NP_079922.2

name	B430119L13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542179 CCDS:CCDS16780.1 GeneID:320974 MGI:2445154
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : neuronal leucine rich repeat-4 protein_id : NP_796277.2

name	5830467P10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487315 GeneID:241639 MGI:2443583
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 product : kindlin-1 protein_id : NP_932146.2

name	LOC100043463 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043463
definition	number : 4 pseudo : _no_value

name	LOC100043463 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043463
definition	number : 3 pseudo : _no_value

name	LOC100043463 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043463
definition	number : 2 pseudo : _no_value

name	LOC100043463 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043463
definition	number : 1 pseudo : _no_value

name	LOC100043470 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043470
definition	number : 3 pseudo : _no_value

name	LOC100043470 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043470
definition	number : 2 pseudo : _no_value

name	LOC100043470 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043470
definition	number : 1 pseudo : _no_value

name	LOC383801 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383801
definition	number : 1 pseudo : _no_value

name	LOC668906 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668906
definition	number : 1 pseudo : _no_value

name	LOC668906 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668906
definition	number : 2 pseudo : _no_value

name	LOC668906 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668906
definition	number : 3 pseudo : _no_value

name	LOC668906 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668906
definition	number : 4 pseudo : _no_value

name	LOC668906 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668906
definition	number : 5 pseudo : _no_value

name	LOC668906 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668906
definition	number : 6 pseudo : _no_value

name	LOC668908 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668908
definition	number : 2 pseudo : _no_value

name	LOC668908 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668908
definition	number : 1 pseudo : _no_value

name	LOC626513 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250160 GeneID:626513
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 22 Proteins product : similar to heterogeneous nuclear ribonucleoprotein A3 pseudo : _no_value transcript_id : XR_034932.1

clone name	MSMg01-473E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460C06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-291L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240K02
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-085E20.T7 (MSMg01no085_e20.b1)	MSMg01-085E20.TJ (MSMg01no085_e20.g1)
ACC	AG304929	AG304930
length	1,036	1,490
length of high quality (start - end)	146 (23 - 168)	59 (125 - 183)
definition	CHROMAT_FILE: MSMg01no085_e20.b1 PHD_FILE: MSMg01no085_e20.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:35:54 2005	CHROMAT_FILE: MSMg01no085_e20.g1 PHD_FILE: MSMg01no085_e20.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:35:54 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CCCTAAAATGGATCCCCGTCTACACAGAAGGACCAACACTGCCCAAGCAG ACCCTGTGTGAGGCTGTGGACTCGCCATCACAGTGCACTCTGTTGAGAGC AGAGGAGAGCACAGAAGTCCTTCCACAACATCTCTCTGCTGCCAGCCTCA TCTAAACAATGTGGTGTACCAGCACAGCAAACTGGCATGAGGCTTCTTAT GACCTCATAGGGCATGATTATGGACCATACCATGAACAAATCTGACAACT CTCCCATCTGCACACATCACTGCTGTCTGCCCTTGGAATCTTTTTTATCT TTACCATGTCTCAAACTCCGATCTAAAACAATCACTTATCTCCCCCTGTT CTGACCCCCCTAAATTTACTTCGTCTGAACATTGTCTTATTAGATTTCTT CATTCTCAAGTTAGTGAGACTGTTTCCAGTACTCCTTAAGGCTGTCTTAC ATAGTGTTAAAAATTGTCCTCCTACCCAGTAATTTTCTTATACTTTTTCT TTATGATAATGCCTCATTGTCTTTCCGTTTCTTTCTTCTTCTTCTTGATA ATATATAAGCTATTGTTTCTTCTTTTCTTCTATTATTTTCTTCTTCTTAT TTTTATTTCAACTCTCTTTTTATCATATTTCTATCTGTATTTTTCTATAT ACACCTTTTCTTAATTTTTATTCTCTTTATGTATTTCTCTTTATTATTCT CTTATATTTTTCTTTACTTTTTTTTTTTTTTTTTTCTATTTTTTTTTTTA CTTTTATTTTTATTTTAAAAATTTTCTTATCTTTTCTTTTTATAACTATT TTATTTTCCTTTTTTTATATTTATTTTTCCTATTCTATTATTTTTTTTTT CATATTATTTTTTTTTTATCTTAATCATATTAATTATTTTATTTTATATT TTTTCTTTTTTTTTATTATCTTTTTTATTCTTCATCCTTATTTATATCCT TACTTATTTTATATTTTTATTCTATTTTATATCTATTACATTTTACATTT TTATATTTCTCATTTTTCTCTTATACATATTCTTTA	NTTTGAGCTAGGAGGCTGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXCCTTTAAATCAAATCGCCTTTACTAGTTGGGTGT TAGTTGCCTGTAGGTAGCCCCCACCTTCAATTTCCACACTGGTGAGGCAG AGGCAAGTGATCTCTTCAAGTTCCAGCCTGGCCAATAGGCAGAGTTTCAA GATAGCCAAGACTACATATAAGAGGATTCTGTCTTGAAAAAACAAAAACA AAAATCAGTTGGGTAGCGGTGTTGTACTCTGGAGGCATAGTCTATCGTGT CTCTATTAAGTTCATACTCCAGTTTGTTTCTTCTAGTGAGTTCCAGCTGT ATCCAGTAGTACTCAGTGAAACCCTGTCCCTAATAATTAACTATTTTTTT TTTTTTTTTTCACCTTCCTTATATTTTCTCCTATTTTTTTCTTCTTTTTT TTCCCCCCTTTTTTTCTCCTCCCCCCCCCATTATATAGTTAATTTTATAC TTTATAAAAAATTTGATCTTTTTCTTTTCTTCTTTTTTTATTTTTTTATA TTAATCTTTTTATATTTTTTTTTATTATTTCTTATTCTCTTTTTATTTCA CTTATTTTTTTACTATTTTTACTTTCTTACTTTCTTATTCTTATCTTATC TCCTTCTACTTTTATCTTTTTTTTTCTTTTTATACTATTTTCTTCTTTCT TTTTAAACATTTATTATTTTCTTTTATTCTCTTATTTTTTATATTCCTCT CTATATTTTCTATTCTTTCATTTTTTTTACTTCTTTTTTACTTTTCTTAC TATTCTTTCCTTCATCTCCTTTCTTATATTTCTTTGTTATTTTTACTCTT CCACTTCTTCTCTATCTCTTTATTTTTTTATTTCTTTTCATTTTTTTTTT TTTTCTTTACTATTATTTCTATAATTTTTTTCNTTTTCTCATTTTTTATT TTTTTTTTTACGATTATTTTTTATATTCTCTATATTTCTATCCTTTTATC ATTATTCTTCATTTCTTAATTTTTTTCTATTTTTAGCTCTTTAGTATATT AATTAATACTCTGTTATGATTTCTTATCTTCCTTTTATCTCTGTTTCCTA TTCTCTCTATCTTCACTACTATATTTATTTTCTTTCCTCTCTTTTATTTA CTTTCTTTATCTTATTTCTTTATTATATATTATTTATGTTTACTCATACT TTTCTCATTATATATATATTCATCTAAATATTTCTCTCGACATCTAAATA TTTCTCATCTTGTACTTCCATCTATTAATATATCCATATTTCTACTATTG ATACATTTTCTATATTTGCCTTCTTATATTCACTTACCATTAATTGCGTT TCCTTATTTACTTATCTTCTTTTTTCATATNCTTCTCTTAACTTTCTTAC TCTATATTTATACTCTGTTATTGTATATTTACTTATTCTCCTCTTCTTTT ATTCATATTCTATTGATATTATAGTGCAATATTTATTCTG
quality values	Open. Hide. 8 8 8 8 8 8 10 17 8 8 8 8 10 8 11 11 10 9 9 19 20 20 28 22 28 25 25 25 22 28 22 31 33 39 39 39 42 34 37 34 34 24 30 34 29 28 20 19 15 14 14 26 30 42 39 31 31 42 42 36 37 37 35 36 29 25 25 26 24 26 24 24 20 25 25 39 39 39 39 39 19 19 10 10 10 19 20 44 44 57 57 57 57 57 44 42 35 35 43 32 26 13 13 15 24 28 27 20 27 27 43 38 38 20 20 20 32 38 43 43 50 43 43 42 42 37 37 35 35 37 43 43 52 57 52 52 52 43 43 32 32 32 35 43 43 52 57 57 52 52 57 43 43 23 23 23 43 43 43 43 33 33 27 27 17 24 24 32 15 15 12 12 11 15 21 28 18 18 16 38 18 18 18 27 13 17 17 32 32 17 17 20 32 32 36 24 24 15 25 24 35 33 33 24 24 11 12 14 14 15 19 13 12 18 10 8 10 10 8 8 8 10 12 13 24 18 15 15 14 14 14 32 32 43 42 35 30 30 30 30 30 37 32 36 23 20 20 24 24 39 44 44 43 43 36 36 23 23 11 10 11 23 26 39 39 43 36 43 39 28 28 14 12 12 22 15 20 24 15 16 13 16 13 23 21 12 12 11 11 11 11 18 21 9 9 8 8 6 10 13 26 32 28 31 35 28 33 28 28 22 22 32 21 24 16 25 24 31 20 20 20 19 19 13 12 11 12 12 12 12 22 15 20 20 28 11 13 8 8 8 8 11 11 12 15 15 11 11 11 14 14 10 10 9 9 12 12 12 9 10 10 10 11 10 10 10 10 10 10 10 10 13 14 12 10 10 11 11 12 12 13 15 21 15 20 20 18 19 15 13 13 11 12 12 23 26 13 13 12 12 21 24 16 10 8 8 8 8 9 11 9 9 9 8 8 8 8 8 8 18 13 19 11 14 10 12 10 10 10 10 11 13 10 9 9 10 10 10 11 11 11 11 10 12 10 8 8 8 8 12 12 13 11 10 8 8 8 10 8 10 11 11 11 13 11 12 8 12 8 8 8 10 7 7 8 8 9 9 9 11 18 21 22 12 12 11 11 8 10 8 8 8 11 10 10 10 13 9 9 9 10 9 9 9 8 8 8 8 8 10 9 9 9 8 9 9 8 10 8 13 13 12 10 8 8 8 8 8 8 10 10 8 8 8 10 10 6 6 8 8 6 7 8 8 8 8 8 8 6 6 8 10 10 10 11 10 8 6 6 8 8 10 10 10 10 8 8 8 6 6 8 10 11 8 8 8 13 10 8 8 6 6 8 8 6 6 12 8 8 8 8 8 6 6 8 8 6 6 6 8 8 8 9 9 11 11 10 10 12 8 8 8 8 8 8 8 8 8 8 8 9 9 8 6 8 8 6 6 10 8 6 6 8 8 8 8 8 8 8 8 9 9 10 9 9 10 10 10 12 12 9 8 8 8 8 8 8 9 9 16 12 8 8 8 8 8 8 12 9 9 9 8 8 8 8 8 8 10 11 9 9 9 10 9 9 9 9 9 9 13 8 8 6 6 8 8 10 8 8 8 8 12 10 10 8 8 8 10 10 13 15 15 10 10 8 8 8 12 8 10 10 10 8 8 8 11 17 16 8 8 8 10 10 10 10 10 8 8 9 12 15 16 14 14 18 12 12 11 10 8 8 10 10 10 6 6 8 8 8 8 6 6 8 8 10 10 10 10 11 11 10 10 10 10 9 10 10 10 8 8 8 10 10 10 8 8 7 8 8 8 8 9 9 8 8 8 10 10 13 10 11 10 12 10 13 16 9 9 9 12 15 18 13 8 8 6 6 8 8 12 12 12 12 10 10 10 9 10 9 8 8 8 8 8 8 10 8 8 12 8 8 8 11 13 11 11 15 10 10 8 8 8 8 8 10 9 10 8 8 10 10 10 9 9 9 9 9 9 10 10 10 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 10 10 9 9 9 8 8 6 6 6 6 8 8 10 10 11 11 11 12 13 12 12 19 12 11 9 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 8 8 8 8 6 7 8 8 8 9 9 11 9 10 8 8 8 8 8 6 6 8 8 10 10 12 15 13 18 11 8 8 8 10 8 8 8 8 8 8 8 8 10 10 8 8 8 10 8 8 8 8 9 9 9 10 10 11 11 11 11 10 10 10 12 12 11 11 13 11 11 10 8 8 8 8 10 10 12 8 8 8 8 8 8 8 8 8 7 6 8 8 8 8 8 9 9 9 9 9 9	Open. Hide. 0 3 6 6 6 6 6 6 8 8 6 7 6 6 6 8 6 6 6 6 9 10 16 9 11 8 8 8 8 14 19 11 11 8 9 10 21 21 33 28 28 33 39 33 38 36 36 35 35 35 35 35 35 36 47 47 50 50 50 59 59 47 23 23 9 9 10 10 8 8 8 8 8 8 8 8 8 8 8 16 30 34 47 50 39 44 44 47 53 36 36 35 30 36 36 47 37 37 33 33 31 28 21 13 9 9 8 8 8 8 8 11 12 11 11 11 11 12 17 14 20 11 11 11 21 21 30 33 40 40 43 43 43 43 43 43 39 34 36 37 34 29 30 28 36 33 28 28 23 23 23 41 41 35 35 41 41 32 35 39 36 46 47 41 36 30 29 31 31 28 30 25 29 28 37 28 19 17 26 17 16 25 21 23 11 13 13 15 15 15 11 11 11 24 24 44 37 32 32 27 28 33 34 27 18 18 16 30 18 27 18 30 19 18 11 15 12 18 18 18 12 12 15 32 38 43 43 31 32 32 32 32 43 47 57 44 32 28 17 17 20 20 20 20 28 27 27 27 28 27 30 33 32 32 19 24 17 17 17 22 19 13 13 14 19 22 15 14 14 14 17 19 16 17 11 11 11 12 16 18 15 15 15 15 11 8 8 10 10 8 8 8 8 8 8 8 10 10 10 10 18 10 8 8 12 10 10 10 11 18 10 12 12 11 10 9 10 10 10 10 11 11 11 8 15 15 15 15 8 8 8 8 9 9 10 9 9 12 18 15 15 18 12 12 10 10 15 14 14 8 10 9 10 10 9 10 13 10 10 8 8 6 6 8 8 10 10 12 12 13 14 14 18 17 15 17 10 10 10 10 12 10 10 13 10 8 8 8 8 8 8 12 11 11 15 13 13 16 16 18 13 14 10 10 10 11 10 10 12 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 10 6 6 6 6 8 8 8 8 10 12 21 21 10 10 9 7 12 6 8 8 8 8 8 8 10 10 17 17 13 11 10 10 9 9 9 9 10 19 13 10 10 8 8 8 9 13 13 17 15 15 12 10 14 10 8 8 6 6 8 8 8 8 8 7 6 8 8 8 12 8 8 8 8 10 13 11 10 8 8 8 8 8 11 9 11 13 10 9 9 9 9 8 14 13 8 8 8 8 8 8 8 8 8 8 10 7 9 11 11 10 8 8 8 8 8 8 9 11 10 10 8 8 8 8 8 6 6 8 8 10 9 10 13 8 8 10 10 9 9 10 8 8 8 9 10 10 9 9 8 8 8 8 8 8 11 11 8 10 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 11 12 10 9 8 8 8 8 8 8 8 8 10 10 6 6 8 8 9 11 10 10 13 8 8 8 8 8 8 8 8 8 8 8 12 8 8 8 12 8 8 8 8 10 11 8 8 6 6 8 8 8 8 8 8 11 13 14 10 11 11 10 12 10 10 13 13 10 9 9 9 8 8 8 8 8 8 8 6 6 8 8 10 10 10 9 9 9 9 10 10 9 9 10 10 10 10 8 6 6 6 8 8 16 11 8 8 8 8 8 8 9 11 17 13 9 9 9 10 8 11 11 20 15 12 9 7 10 8 10 10 12 12 8 8 10 10 10 8 9 9 12 8 10 6 6 6 6 8 8 6 8 8 7 6 8 6 6 10 8 8 6 6 8 8 11 15 12 9 9 9 8 8 8 9 9 10 10 9 10 10 11 12 12 10 15 18 11 10 10 10 8 8 8 8 8 8 8 8 8 8 10 10 13 8 8 6 9 8 8 10 10 10 12 12 8 8 8 8 8 8 10 8 10 6 6 8 8 6 6 8 8 8 8 8 6 7 6 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 11 10 8 10 8 8 8 10 10 12 8 10 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 9 10 11 18 14 19 15 15 14 15 14 10 10 8 8 8 8 10 9 9 9 9 10 10 8 8 8 8 8 8 9 12 10 13 10 9 13 3 0 3 16 10 6 6 6 6 8 7 8 8 8 8 10 10 16 14 16 15 13 12 11 13 10 10 6 6 6 6 8 8 10 9 9 9 15 10 10 8 8 8 13 8 8 8 8 8 8 8 8 8 10 10 10 11 10 10 10 15 13 15 10 11 10 9 9 9 9 10 9 10 8 8 8 8 8 8 8 8 11 8 8 10 8 8 8 9 14 13 10 10 8 8 11 8 8 8 8 8 8 10 9 8 8 8 6 7 10 6 6 8 8 8 8 6 6 8 8 8 8 8 8 8 6 7 8 8 8 8 10 10 17 11 10 10 11 10 10 12 16 12 11 12 11 8 8 6 6 8 8 12 12 6 6 6 6 8 8 9 9 9 11 11 12 11 11 8 8 8 8 8 8 8 8 6 8 8 10 10 12 10 9 9 10 9 9 9 10 10 10 8 8 6 6 8 8 8 8 8 8 8 8 10 10 10 8 8 8 8 13 10 10 10 8 12 10 7 7 8 10 10 9 8 8 8 8 8 6 6 8 8 10 10 13 13 11 11 11 9 9 10 10 10 10 10 12 10 12 7 7 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 6 6 8 8 6 8 8 8 8 8 6 6 8 12 7 6 6 6 8 8 6 6 6 8 8 10 9 9 8 8 8 8 12 8 8 8 8 8 8 8 9 9 8 8 6 6 8 8 10 12 8 8 8 8 8 8 8 8 8 8 8 11 8 10 8 8 6 6 6 7 8 8 9 9 9 10 10 9 6 8 6 9 9 8 8 9 6 6 8 6 6 10 8 9 8 8 7 8 8 10 9 8 8 6 6 8 8 8 8 8 8 6 6 8 8 6 6 10 8 8 8 8 8 8 6 6 8 8 10 9 8 8 8 13 15 8 6 6 8 6 8 8 6 6 6 6 6 6 9 9 9 8 6 6 7 6 10 10 8 9 9 8 8 8 8 8 7 8 8 11 12 8 8 8 11 8 8 6 6 8 8 3 0 3 6 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 8 8 9 10 8 8 6 8 6 7 6 6 8 6 6 8 8 8 6 6 8 6 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 16 8 8 6 6 6 7 6 6 8 7 7 7 8 8 8 8 8 8 7 8 6 6 8 8 8 8 8 8 8 8 8 6 8 7 7 9 9 9 9 7 8 8 8 8 8 8 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no085_e20.b1 MSMg01no085_e20.b1 CHROMAT_FILE:
MSMg01no085_e20.b1 PHD_FILE: MSMg01no085_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:54 2005
         (146 letters)



>mm_chr2_131900557_131901102
          Length = 546

 Score =  275 bits (142), Expect = 1e-78
 Identities = 145/146 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacagaaggaccaacactgcccaagcagaccctgtgtgaggctgtggactcgccatcaca 60
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 cacagaaggaccaacactgcccaagcagaccctgtgtgaggctgcggactcgccatcaca 260

                                                                       
Query: 61  gtgcactctgttgagagcagaggagagcacagaagtccttccacaacatctctctgctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgcactctgttgagagcagaggagagcacagaagtccttccacaacatctctctgctgc 320

                                     
Query: 121 cagcctcatctaaacaatgtggtgta 146
           ||||||||||||||||||||||||||
Sbjct: 321 cagcctcatctaaacaatgtggtgta 346


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 546
Length adjustment: 8
Effective length of query: 138
Effective length of database: 538
Effective search space:    74244
Effective search space used:    74244
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information