Query= MSMg01no086_h17.b1 MSMg01no086_h17.b1 CHROMAT_FILE:
MSMg01no086_h17.b1 PHD_FILE: MSMg01no086_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:14 2005
(555 letters)
>mm_chr2_91108735_91109689
Length = 955
Score = 1065 bits (551), Expect = 0.0
Identities = 554/555 (99%)
Strand = Plus / Minus
Query: 1 agacctgccctaccagctccagccaagactgttcaagccaaagacggacaaggttagggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 agacctgccctaccagctccagccaagactgttcaagccaaagacggacaaggttagggg 696
Query: 61 agctcactgatgcccaagtcagtaagagcctacacccgaggcaccaaagacaaagtaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 agctcactgatgcccaagtcagtaagagcctacacccgaggcaccaaagacaaagtaccc 636
Query: 121 aaccaaagcgacagttgttaggcaggggagctgcccgacagcctcagctgctagagcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aaccaaagcgacagttgttaggcaggggagctgcccgacagcctcagctgctagagcagg 576
Query: 181 gaactggcaggcaggggacaggtttcccaagccctggttacctctggtacaagagggccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gaactggcaggcaggggacaggtttcccaagccctggttacctctggtacaagagggccc 516
Query: 241 tttagctgacagatacatggactctggaggaaaaatagacgtgtggctaacaagggccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tttagctgacagatacatggactctggaggaaaaatagacgtgtggctaacaagggccca 456
Query: 301 ccccacaagcttcataaagctcccaaacccagaagcctatgcagagcctgcttcaaagtc 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ccccagaagcttcataaagctcccaaacccagaagcctatgcagagcctgcttcaaagtc 396
Query: 361 tgccgtctcacagaatcaactggatagccactggcttcctgccccaacccccaagagtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tgccgtctcacagaatcaactggatagccactggcttcctgccccaacccccaagagtca 336
Query: 421 acagaacaaaccaaggccagcaaaggaattgtttaccataaccaagtctgaaggccacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 acagaacaaaccaaggccagcaaaggaattgtttaccataaccaagtctgaaggccacaa 276
Query: 481 aggagtgggaaaggctgaactttgaaaggacagcattacctctagccaggagcagctcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aggagtgggaaaggctgaactttgaaaggacagcattacctctagccaggagcagctcaa 216
Query: 541 agctatccccacacc 555
|||||||||||||||
Sbjct: 215 agctatccccacacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_h17.g1 MSMg01no086_h17.g1 CHROMAT_FILE:
MSMg01no086_h17.g1 PHD_FILE: MSMg01no086_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:15 2005
(629 letters)
>mm_chr2_91063799_91064827
Length = 1029
Score = 1164 bits (602), Expect = 0.0
Identities = 618/628 (98%), Gaps = 10/628 (1%)
Strand = Plus / Plus
Query: 1 tgtcctcattacccattgagccatctcactagccactgggtacgaaaaacatttaaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtcctcattacccattgagccatctcactagccactgggtacgaaaaacatttaaaatc 260
Query: 61 tccagataaactatgacaattaataaatgtagatttctgcttctagccatgctaatatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccagataaactatgacaattaataaatgtagatttctgcttctagccatgctaatatca 320
Query: 121 gaaatcaaacacacctcatgttttaaacaactagaaaaatgaacaaaatacatgaaacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaatcaaacacacctcatgttttaaacaactagaaaaatgaacaaaatacatgaaacac 380
Query: 181 atttacaatacatatgcaataggcagacaacaaaggatggaaaagtaatgaggttagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttacaatacatatgcaataggcagacaacaaaggatggaaaagtaatgaggttagctt 440
Query: 241 gcaactgtgcaagcttcttgcttggagaatatatccaggctagggtgggagaacaatagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaactgtgcaagcttcttgcttggagaatatatccaggctagggtgggagaacaatagc 500
Query: 301 caccatgtgtcagttagatgggcagagagactgtcaacatggttttgaggaggcagatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caccatgtgtcagttagatgggcagagagactgtcaacatggttttgaggaggcagatgg 560
Query: 361 acagagaacactggagattttcccacggacttcctccaggctttgactgagtactattgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acagagaacactggagattttcccacggacttcctccaggctttgactgagtactattgt 620
Query: 421 gtaaatgtatgtgaggaaataaaaatgccacaaattagttggagaaaatctttaaactga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtaaatgtatgtgaggaaataaaaatgccacaaattagttggagaaaatctttaaactga 680
Query: 481 tctgtaatctcatctccaatgggattttttcactattcagcccagcctggcctacatctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctgtaatctcatctccaatgggattttttcactattcagcccagcctggcctacatctt 740
Query: 541 tttgtcctgtcttttcttcccgagtgctaagattacagactgtgaagcaacactatacca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttgtcctgtcttttcttcccgagtgctaagattacagactgtgaagcaacactatacca 800
Query: 601 aacgtgaaaccattcttaatatctaggg 628
| | || ||||||||||||||
Sbjct: 801 a---t------at-cttaatatctaggg 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
