Query= MSMg01no091_e20.b1 MSMg01no091_e20.b1 CHROMAT_FILE:
MSMg01no091_e20.b1 PHD_FILE: MSMg01no091_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:46 2005
(295 letters)
>mm_chr2_20200586_20201278
Length = 693
Score = 538 bits (278), Expect = e-157
Identities = 290/294 (98%), Gaps = 2/294 (0%)
Strand = Plus / Minus
Query: 1 gcttctctttgtcactacccaccacaaatgatttttttgcagtaaatatgaacttccaaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 492 gcttctctttgtcactacccaccacaaatga-ttttttgcagtaaatatgaacttccaaa 434
Query: 61 caagttaattacataggagagcaacctgcacttcacccaagatttcgggtattatttttc 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 433 caagttaattacataggagagcaacctgcacttcacccaagatttcaggtattatttttc 374
Query: 121 atcagatatgagttatccaaagtagctaaaagagatgattagtaaaggtctttattgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atcagatatgagttatccaaagtagctaaaagagatgattagtaaaggtctttattgaat 314
Query: 181 gtgggttcaaaccaatcaaatacagctattgaaatagctttctttaatctagtgttttct 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gtgggttcaaaccaa-caaatacagctattgaaatagctttctttaatctagtgttttct 255
Query: 241 actgagtggcaatcttttttattttcctcttcacaatcgcttttggggacttac 294
||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 actgagtggtaatcttttttattttcctcttcacaatcgcttttggggacttac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 693
Length adjustment: 9
Effective length of query: 286
Effective length of database: 684
Effective search space: 195624
Effective search space used: 195624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no091_e20.g1 MSMg01no091_e20.g1 CHROMAT_FILE:
MSMg01no091_e20.g1 PHD_FILE: MSMg01no091_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:46 2005
(231 letters)
>mm_chr2_20011515_20012145
Length = 631
Score = 447 bits (231), Expect = e-130
Identities = 231/231 (100%)
Strand = Plus / Plus
Query: 1 gcttcaatgcagctagcagctttagaaatattacaccaaagatgaaaaataatttacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcttcaatgcagctagcagctttagaaatattacaccaaagatgaaaaataatttacagc 260
Query: 61 cacaaatttaaaaacaaaaaacaatcattctgaaaaacatttcttggagtataaaagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaaatttaaaaacaaaaaacaatcattctgaaaaacatttcttggagtataaaagttt 320
Query: 121 aatttttaaaataatattttaaggactcaaacaattataagcttacatttgcaccttgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatttttaaaataatattttaaggactcaaacaattataagcttacatttgcaccttgca 380
Query: 181 aattctgaatattatggtctttgtgtctgtgtctcgtcatgactgtgctaa 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattctgaatattatggtctttgtgtctgtgtctcgtcatgactgtgctaa 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
