Query= MSMg01no093_p02.b1 MSMg01no093_p02.b1 CHROMAT_FILE:
MSMg01no093_p02.b1 PHD_FILE: MSMg01no093_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:18 2005
(170 letters)
>mm_chr2_86071370_86071940
Length = 571
Score = 308 bits (159), Expect = 2e-88
Identities = 168/171 (98%), Gaps = 1/171 (0%)
Strand = Plus / Minus
Query: 1 acatttatacactaatgaatacaagcttccctcatttaatgaacatcctctaggcattta 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 371 acatttatacactaatgaatacaagtttccctcatttaatgaacatcctctaggcattta 312
Query: 61 cttatactctgaagtgttctgagattattcaaaatattgcttggcacctcccaaggggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 311 cttatactctgaagtgttctgagattattcaaaatattgcttggcacctcccaagggaga 252
Query: 121 gaatatcaaaagatgagagaatatatataaactgtgttaga-ttttccatg 170
||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 251 gaatatcaaaagatgagagaatatatataaactgtgttagatttttccatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 170
Length of database: 571
Length adjustment: 8
Effective length of query: 162
Effective length of database: 563
Effective search space: 91206
Effective search space used: 91206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no093_p02.g1 MSMg01no093_p02.g1 CHROMAT_FILE:
MSMg01no093_p02.g1 PHD_FILE: MSMg01no093_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:18 2005
(581 letters)
>mm_chr2_86019811_86020792
Length = 982
Score = 874 bits (452), Expect = 0.0
Identities = 554/602 (92%), Gaps = 33/602 (5%)
Strand = Plus / Plus
Query: 4 atcctctctgactcttacactctttcctgtttctttttctata-ggggtctctgagtcct 62
||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 204 atcctctctgactcttacactctttcctgtttctttttccgtagggggtctctgagtcct 263
Query: 63 gagtggaaggatttggtagagacatttttatttttaattgaatacaatttttgtaattct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagtggaaggatttggtagagacatttttatttttaattgaatacaatttttgtaattct 323
Query: 123 ctttcctttttgtaacctccccctcagcc----tgaagcaggctgagccaaaccttgact 178
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 324 ctttcctttttgtaacctccccctcagcctgaatgaagcaggctgagccaaaccttgact 383
Query: 179 ttgctgccacagaggagattacctaaggtggagccttcct---cccta------------ 223
||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 384 ttgctgccaca---gagattacctaaggtggagccttcctccaccctatgtaatcactct 440
Query: 224 --gatcactctattattgttcagccactgtcg-ctgttactcttcaagatactgcaacct 280
||||||||||| |||||||||||||||| | || |||||||||||||||||||||| |
Sbjct: 441 atgatcactctatgattgttcagccactgttgcct-ttactcttcaagatactgcaacat 499
Query: 281 ggatactgctacctgctgagaggccccccggagctgcacatagtcacctgtattctgttt 340
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 500 ggatactgctacctgctgagaggccccccggagctgcacatagtcacctgca-gctgttt 558
Query: 341 ccagcctccaagaatgaaccagtggggggatgggcctctccctcttctttaccagcagga 400
|||| ||||||||||||||||||||||||||||||||| ||||||| |||| |||||||
Sbjct: 559 ccaggctccaagaatgaaccagtggggggatgggcctccccctcttgtttataagcagga 618
Query: 401 tcccccgttaaacctttgagcgttgaacacactagcttgtcttggttttcattatttctc 460
| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 619 t-ccccattaaacctttgagcgttgaacaaactagcttgtcttggttttcattatttctc 677
Query: 461 tacctgcctaggttccctcttctctttcagctccgattgcctcccaggcttgaacccaga 520
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gacctgcctaggttccctcttctctttcagctccgattgcctcccaggcttgaacccaga 737
Query: 521 tatgagagtcacaggccggccccaacacttttttt--gttttgtttt-gtttttgctttt 577
||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||
Sbjct: 738 tatgagagtcacaggccggccccaacacttttttttcgttttgtttttgtttttg-tttt 796
Query: 578 tg 579
||
Sbjct: 797 tg 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 982
Length adjustment: 10
Effective length of query: 571
Effective length of database: 972
Effective search space: 555012
Effective search space used: 555012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
