MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-094D22
Chromosome	2 (Build37)
Map Location	169,560,350 - 169,560,648
singlet/doublet	singlet
Overlap gene	Tshz2
Upstream gene	Atp9a, Sall4, Zfp64, LOC100043909, EG668954
Downstream gene	LOC100043737, LOC100043910, Zfp217, Silg111, LOC100043739, Bcas1, LOC228916, Cyp24a1, Pfdn4, 4930470P17Rik, Dok5
Link	Open Mouse BAC browser

Click to get alignment info.

name	Atp9a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11981 MGI:1330826
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sall4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99377 MGI:2139360
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Zfp64 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22722 MGI:107342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043909 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG668954 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668954 MGI:3643854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Tshz2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228911 MGI:2153084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043737 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100043910 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043910
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Zfp217 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228913 MGI:2685408
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Silg111 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:20461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 127 ESTs, 1 Protein

name	LOC100043739 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043739
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Bcas1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76960 MGI:1924210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC228916 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:228916
definition	note : ubiquitin-homology domain-like pseudo : _no_value

name	Cyp24a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13081 MGI:88593
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pfdn4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109054 MGI:1923512
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930470P17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67637 MGI:1914887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dok5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76829 MGI:1924079
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp9a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130946 GeneID:11981 MGI:1330826
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, class II, type 9A transcript_id : NM_015731.3

name	Sall4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117553632 GeneID:99377 MGI:2139360
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sal-like 4 (Drosophila) transcript_id : NM_201396.2

name	Sall4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117553622 GeneID:99377 MGI:2139360
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sal-like 4 (Drosophila) transcript_id : NM_201395.2

name	Sall4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117553630 GeneID:99377 MGI:2139360
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sal-like 4 (Drosophila) transcript_id : NM_175303.3

name	Zfp64 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677622 GeneID:22722 MGI:107342
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 64 transcript_id : NM_009564.1

name	EG668954 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250123 GeneID:668954 MGI:3643854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG668954 transcript_id : XM_001005109.2

name	Tshz2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61097921 GeneID:228911 MGI:2153084
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : teashirt zinc finger family member 2 transcript_id : NM_080455.1

name	LOC100043737 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250125 GeneID:100043737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043737 transcript_id : XM_001480854.1

name	LOC100043910 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250262 GeneID:100043910
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043910 transcript_id : XM_001481219.1

name	Zfp217 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363009 GeneID:228913 MGI:2685408
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 217 transcript_id : NM_001033299.2

name	Silg111 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367444 GeneID:20461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 127 ESTs, 1 Protein product : silica-induced gene 111 transcript_id : XM_001005112.1

name	LOC100043739 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250129 GeneID:100043739
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043739 transcript_id : XM_001480856.1

name	Bcas1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30023813 GeneID:76960 MGI:1924210
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : breast carcinoma amplified sequence 1 transcript_id : NM_029815.1

name	Cyp24a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129807 GeneID:13081 MGI:88593
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 24, subfamily a, polypeptide 1 transcript_id : NM_009996.3

name	Pfdn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61656177 GeneID:109054 MGI:1923512
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prefoldin 4 transcript_id : NM_001013369.1

name	Dok5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802258 GeneID:76829 MGI:1924079
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : docking protein 5 transcript_id : NM_029761.3

name	Atp9a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40795674 GeneID:11981 MGI:1330826
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004012 - phospholipid-translocating ATPase activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : ATPase, class 2; ATPase 9A, p type; Class II; ATPase 9A, class II product : ATPase, class II, type 9A protein_id : NP_056546.2

name	Sall4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117553633 CCDS:CCDS17117.1 GeneID:99377 MGI:2139360
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IC] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030326 - embryonic limb morphogenesis [Evidence IGI] [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI] [Evidence IDA] codon_start : 1 note : isoform c is encoded by transcript variant c product : sal-like 4 isoform c protein_id : NP_958798.2

name	Sall4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117553623 CCDS:CCDS17116.1 GeneID:99377 MGI:2139360
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IC] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030326 - embryonic limb morphogenesis [Evidence IGI] [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI] [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant b product : sal-like 4 isoform b protein_id : NP_958797.2

name	Sall4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117553631 CCDS:CCDS17115.1 GeneID:99377 MGI:2139360
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IC] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030326 - embryonic limb morphogenesis [Evidence IGI] [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI] [Evidence IDA] codon_start : 1 note : isoform a is encoded by transcript variant a product : sal-like 4 isoform a protein_id : NP_780512.2

name	Zfp64 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677623 GeneID:22722 MGI:107342
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : zinc finger protein 64 protein_id : NP_033590.1

name	EG668954 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250124 GeneID:668954 MGI:3643854
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001005109.2

name	Tshz2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61097922 GeneID:228911 MGI:2153084
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : teashirt 2; zinc finger protein 218 product : serologically defined colon cancer antigen 33 like protein_id : NP_536703.1

name	LOC100043737 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250126 GeneID:100043737
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480904.1

name	LOC100043910 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250263 GeneID:100043910
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481269.1

name	Zfp217 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677492 CCDS:CCDS17120.1 GeneID:228913 MGI:2685408
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007569 - cell aging [Evidence ISS] codon_start : 1 product : zinc finger protein 217 protein_id : NP_001028471.1

name	Silg111 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94367445 GeneID:20461
definition	codon_start : 1 note : overriding stop codons product : similar to HAX1XS protein_id : XP_001005112.1 transl_except : (pos:170110685..170110687,aa:OTHER)

name	LOC100043739 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250130 GeneID:100043739
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480906.1

name	Bcas1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30023814 CCDS:CCDS17121.1 GeneID:76960 MGI:1924210
definition	GO_component : GO:0005829 - cytosol [Evidence ISS] GO_function : GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : amplified in breast cancer 1 product : breast carcinoma amplified sequence 1 protein_id : NP_084091.1

name	Cyp24a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753572 CCDS:CCDS17122.1 GeneID:13081 MGI:88593
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0008403 - 25-hydroxycholecalciferol-24-hydroxylase activity [Evidence IMP]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0042359 - vitamin D metabolism [Evidence IMP] codon_start : 1 note : cytochrome P450, 24; 25-hydroxyvitamin D-24-hydroxylase; cytochrome P450, 24a1 product : cytochrome P450, family 24, subfamily a, polypeptide 1 protein_id : NP_034126.1

name	Pfdn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61656178 GeneID:109054 MGI:1923512
definition	GO_function : GO:0051082 - unfolded protein binding [Evidence IEA] codon_start : 1 product : prefoldin 4 protein_id : NP_001013387.1

name	Dok5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981355 CCDS:CCDS17125.1 GeneID:76829 MGI:1924079
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005158 - insulin receptor binding [Evidence IEA]; GO:0005066 - transmembrane receptor protein tyrosine kinase signaling protein activity [Evidence IPI] GO_process : GO:0000165 - MAPKKK cascade [Evidence IDA]; GO:0007399 - nervous system development [Evidence IDA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IPI] codon_start : 1 exception : mismatches in translation note : downstream of tyrosine kinase 5 product : docking protein 5 protein_id : NP_084037.2

name	LOC100043909 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043909
definition	number : 1 pseudo : _no_value

name	4930470P17Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149249785 GeneID:67637 MGI:1914887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930470P17 gene transcript_id : XR_035478.1

clone name	MSMg01-158J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384E11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-503F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393G11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-066G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076E20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-094D22.T7 (MSMg01no094_d22.b1)	MSMg01-094D22.TJ (MSMg01no094_d22.g1)
ACC	AG311467	AG311468
length	1,697	717
length of high quality (start - end)	---	297 (75 - 371)
definition	CHROMAT_FILE: MSMg01no094_d22.b1 PHD_FILE: MSMg01no094_d22.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:49:49 2005	CHROMAT_FILE: MSMg01no094_d22.g1 PHD_FILE: MSMg01no094_d22.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:49:49 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NNNCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGN TTNNNNGGGGGGNNNNNNNNNNGGGGNNNNTGNNTCGGAGGCGGAGGTTG TTTTGGTGGTGCGTATGACAGATAGTGTCAGTGACCGGCACTAGATATCC GAAGCTGCAACGTCATTACGCGCGTAGGTAGAGCATGCACCGGCGGCGCA CACGTTCAGGAGGTCTTCGTCCTGCCGCTGATCTTGTGACTGTCACTCGC TATCGCGCGGCGCGCTTGGCACGTGACTCGGCGAGCGAAGAGAGCGATGA GAAGTACACACGCATGATCGACGGAAGCTGTACCGCGTAGGACGAGCGGG AGAGTCGGTGCACACGCGCCTGTAGTGGAGCGCTGTAGTGTGCGATGTGA GAGATATGATTCAGGTGCGTAGCTCGCGTACTCTTACGTATCGTGTGTGA GANGGTAGCGACGACATCTGCGCGCGGTGCTGCNGCGGCGACGGTGGTCC TGGGACGGCGAGAGCGANGTGGNGTGCGCAGCGCGCGGCGCCGAGAGTGA CGGTGTGGTGAGGGCGCGCGGAGCNATAGATGTGCCTCGCGCAGTCGCAC GAACTCTGTATCACATGTAGAGACAGCTATGCTGATATGTTCGCTACTGC GCGGCTGTATCTGCCGTCGTGCGTGTGTGAGCATTATATATACCATCTAT GTACTACATCTTCTCTATTCGCACGATTGNTTCAGTCTGGTTATTGCGCA ATGTTTCGTCAGCGCTTGCCGCCGTCACGCCCGACTCAGCTGTTAGTACG GACGTGGTGGCAACCGTGNTGNGCCGCGCGCGGCCTGTCTGTGACGCGCG NACGGGGCTCGAGGCGCCGTTAGGCGATGTAGATGTATGCGCGAGTCGGT CATGTCGCGTCGGCGCCGCGTGAGATGGCGGCGGCTGCAGACTCGCTGGC GGATGGCGCCGACGCGNAGTTAGATTCACACGCAGTTAGGACACGCGCTG ATGCCGCTGTCGTANTGGCATGTGCCAGTCGAAATAGGTGTGACGGCGAC CCGGTAGGACAACCGCCGCGCGGAGCGGTGTTATTATCGGCATCATGCGC CGCTTAGACTCTGATTTGTCCAGATGTAGCGAGCTTCGACTATGCATGCT CGCTGTGTATGTGTTAGCGTAGCGTGTAGTGACACCGCCGCCGGTCTCGG CGCGACGCTGCGGCGCGTGGGAGCTCGGTAGTGTATGTCTGCCTATCGAC GAGACACGGACCCGCACTGCTGCGAGCCGCCTCTGNTGTGGCTCCGTGCT ACACGTGGAATGGACGCGCGCGCGCACCTGTAGAGTGNGTCGCGACGTGC GNTNCGATATCTGAGGCGAGCGCGGACGAGCGCTGCGGAGAGAGAGAGTG AGCGTCGCAGCAGGAGAACTAGTAGAGAGCGCGCCGCGCGGTCGTGCACG TCAGTGAGACGACTCGAGTTATCAGGCGCGAATCNTCGAGACGTACTGTC GGTCATATATATTATTGTTGTCTGCGCTGAGCTGACTGTGCGCTCGGCGC AGTGTGTCGCGATGTCGGTAGGTGTTAGCCGCGTGACGCTGCTCCCCGCA NTCACACGCTGATGACGNCANGTGATGACGTCACGAGAGTAGTCATATGG TGTTTCTACCCCCGCCGTGCGCGTCTGTTGNTGTGCTGCGGCNATGG	CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXCAAGGAGGACAGCAGCATCCTTTCAT ATGAGAGGTGAATATTTAGGAAGAGACAGAAATATCACGGCAAGTCAGAA GCCGAGCTCGAGAAGTGTCTGGGGGAAGCCTTCTAGCGGAGCTTCTGAAG TGGTAGGAAGAGGGGTTAGCTGCCCGAGAGACTGTAAGATGGAGCATCAG GTAAGGAAGGGCGTGGCTCAAAGAACACCTGTGGGATGAAGGGGCTGGTG GGGATGCATGGTGCAGCTGGCTAGTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCACACACACACACACACTCTTCCACATGTTTACAC ATACCCCCTTTGCTCCCCCCCACACATCTTTAATCTCAGATACCTTTCAC CTCCGTACGCTTCACTCTCTTCACACTTATATGCGCATTCCACCTTCGAC TTTCACTCTGTCTTATTGGGATAGGCATGTAGTTTCTGGCGCCGAGCAGT CCTATTATGCTGCGTTATTTTGATCCCTCCTCGTTGCGCTGGTCCGCCCT TTGCCCCTTTTTTCATTCTCTCCCTTTTGCCCCCCCGGTTTTTTTTCCCC CCCCTCCCGTGTGTACTCCCTTACCCTTTGTTCCTCCTTTCTCCGCTTTT CCCCCCCCCTCTCTGTG
quality values	Open. Hide. 0 0 0 3 7 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 3 0 3 3 0 0 0 0 3 7 7 7 7 3 0 0 0 0 0 0 0 0 0 0 3 7 7 3 0 0 0 0 3 3 0 0 3 17 8 8 8 8 8 8 8 8 8 8 13 8 6 6 8 22 16 9 9 7 6 8 6 6 8 8 10 17 10 8 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 8 10 9 9 9 8 8 8 8 6 6 8 6 6 6 6 6 8 8 6 6 6 6 8 8 8 11 11 8 6 6 6 6 6 6 6 8 8 7 8 6 6 6 6 6 6 8 8 9 10 10 9 9 9 10 8 8 8 9 12 9 10 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 10 8 8 8 8 8 8 8 6 10 9 9 9 9 10 8 7 6 6 9 9 9 9 9 11 6 6 6 6 9 9 9 9 11 8 11 7 6 6 6 8 8 6 7 7 9 9 7 7 10 6 8 8 8 8 10 6 6 6 6 6 6 8 8 6 6 6 6 8 8 8 10 8 10 10 12 9 9 11 9 9 10 8 8 6 6 6 6 8 8 8 8 8 8 8 11 10 15 12 14 10 10 11 12 6 6 6 6 6 6 8 8 10 11 11 12 9 8 8 8 10 10 10 9 11 9 8 8 8 8 12 6 6 6 7 7 10 10 8 8 8 8 8 8 8 8 8 8 8 8 10 10 9 9 9 6 8 6 6 10 10 10 11 9 9 9 9 7 7 8 8 8 12 7 6 7 8 8 8 8 10 10 10 10 10 11 8 6 6 6 6 6 8 8 8 6 6 6 8 8 10 14 10 11 13 10 8 8 8 8 6 6 6 8 8 10 10 10 6 6 6 6 6 6 6 6 6 6 6 6 7 6 8 12 7 7 7 10 10 3 0 3 8 8 8 8 8 8 6 6 6 6 6 6 6 9 11 11 17 16 20 15 9 9 9 9 8 8 8 8 3 0 3 9 10 8 6 6 6 6 8 6 7 6 6 6 7 8 8 9 6 6 6 6 6 10 13 9 9 9 12 8 8 6 3 0 3 8 8 3 0 3 11 10 8 8 6 6 6 6 6 8 8 10 10 8 8 8 8 6 8 7 8 6 8 13 8 9 9 9 9 9 10 10 8 8 8 8 8 8 10 7 7 9 9 9 9 12 7 6 8 3 0 3 8 9 9 10 12 12 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 8 8 8 6 6 6 6 6 6 6 9 8 8 8 8 6 6 6 7 10 6 7 7 7 7 7 7 9 9 9 9 9 9 8 8 8 8 8 11 15 10 8 8 8 8 8 8 10 13 11 9 9 10 10 10 10 13 12 13 13 10 7 7 7 8 8 8 8 8 8 7 6 7 10 12 10 9 7 7 6 8 6 6 6 8 8 19 23 11 11 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 8 6 8 6 6 10 7 8 10 8 9 9 10 9 13 10 10 8 8 7 3 0 3 6 6 6 6 8 8 8 8 8 8 9 10 11 11 10 10 10 10 10 6 8 6 6 6 6 8 8 8 6 6 6 6 8 6 6 6 6 7 6 8 8 8 8 8 8 8 8 15 11 8 8 6 6 6 8 8 8 6 6 6 6 6 6 6 6 10 9 10 9 8 7 6 6 6 8 6 8 9 9 7 6 8 8 6 6 7 3 0 3 3 0 3 6 8 8 8 8 8 8 8 10 10 9 9 9 9 9 8 8 6 6 6 6 6 6 11 11 11 3 0 3 6 7 10 8 8 8 8 8 8 8 8 8 10 12 7 7 7 7 11 8 10 9 9 9 9 9 8 8 8 8 8 10 10 8 8 8 8 9 8 11 6 7 6 6 8 8 11 10 9 9 9 6 6 6 7 10 8 8 9 12 11 9 8 8 8 8 10 10 9 9 10 6 6 6 6 8 7 7 12 7 7 7 7 7 7 6 6 6 8 8 11 11 10 10 9 9 10 10 10 8 8 6 6 6 6 6 8 8 8 6 8 6 6 3 0 3 6 8 6 6 6 6 8 10 10 10 12 8 8 9 8 7 8 8 7 6 7 8 8 10 8 8 8 8 8 8 8 7 8 6 8 8 6 6 6 6 8 8 8 8 10 3 0 3 8 8 8 8 8 8 8 8 8 6 6 6 7 8 6 8 8 8 6 6 6 6 6 6 8 8 8 8 8 8 6 6 6 6 10 10 12 8 8 8 8 8 8 6 6 6 6 6 6 9 11 10 9 11 8 6 8 6 6 6 8 6 7 7 7 8 8 10 8 8 8 8 8 9 9 9 9 9 9 9 8 10 12 11 8 8 8 8 8 8 8 9 9 8 10 8 9 10 8 12 12 12 12 12 10 8 8 6 6 8 8 10 10 10 8 8 8 8 9 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 10 11 11 11 18 13 11 11 11 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 10 8 7 8 7 7 10 10 6 6 6 6 6 8 10 9 9 8 8 8 8 8 8 7 6 6 6 7 13 15 8 8 6 6 8 7 7 6 8 8 8 8 8 8 8 10 8 8 10 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 9 8 8 7 7 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 6 6 7 6 7 6 7 8 9 9 9 12 12 12 3 0 3 12 7 6 6 6 6 6 8 8 7 7 9 6 7 6 10 6 6 8 8 6 6 8 8 8 6 6 7 13 10 10 10 10 8 9 8 8 8 8 10 6 6 7 7 10 6 6 6 6 3 0 3 6 6 6 6 6 6 6 6 6 6 8 3 0 3 0 3 7 8 8 8 8 6 6 6 6 8 8 8 11 11 9 8 10 10 8 6 6 8 8 10 8 6 6 6 6 9 9 9 9 9 8 6 6 6 6 10 7 7 6 6 6 6 6 6 6 6 6 6 6 6 8 6 8 8 8 8 8 8 8 8 8 8 8 8 8 12 13 8 8 6 6 6 6 8 8 8 8 8 8 8 8 6 6 6 6 8 6 8 10 10 9 8 8 8 8 8 9 9 9 9 10 10 10 10 9 9 9 9 9 10 9 9 9 9 9 9 8 8 8 8 8 6 6 6 3 0 3 8 6 6 6 6 6 7 10 8 8 6 6 8 8 8 9 9 9 8 8 8 8 8 8 6 6 6 6 8 6 6 10 8 15 10 10 9 11 10 9 9 9 6 6 6 6 6 6 8 8 8 8 8 8 8 8 6 6 6 6 7 7 8 6 6 6 8 10 6 6 6 6 8 10 7 9 9 9 8 8 10 8 6 6 6 6 6 6 6 6 8 8 8 10 7 6 6 6 6 6 6 8 8 6 6 6 6 12 7 9 7 7 8 3 0 3 6 8 8 8 8 8 8 8 8 9 9 6 6 6 3 0 3 3 0 3 7 9 7 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 10 7 7 7 6 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 6 6 6 6 8 8 8 8 8 9 9 7 8 3 0 3 8 9 6 6 6 6 6 7 6 3 0 3 6 6 6	Open. Hide. 8 8 8 11 6 6 8 8 15 14 14 13 14 17 10 10 18 22 22 37 30 30 32 32 32 30 32 25 25 13 12 8 8 8 8 8 17 17 30 31 31 28 33 31 36 36 36 35 35 35 42 37 42 42 47 47 37 26 23 18 22 22 21 29 32 42 42 42 36 41 41 41 41 41 42 47 47 47 57 57 57 48 41 41 41 41 41 47 47 48 50 57 57 57 68 50 50 50 50 50 50 57 68 68 68 68 68 57 57 57 57 57 68 68 57 57 57 57 57 43 32 20 20 27 24 32 38 43 57 57 57 57 50 50 50 50 50 50 57 57 57 57 57 57 57 50 50 37 43 43 52 57 57 57 57 54 57 57 68 68 57 59 57 57 57 57 57 57 57 57 57 57 57 57 52 52 57 57 57 57 57 57 57 57 57 52 52 52 57 57 57 57 57 57 57 57 57 47 47 57 45 45 45 57 52 57 57 57 57 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 47 57 57 57 57 57 57 57 57 57 57 52 52 52 52 52 52 52 52 52 52 52 52 52 52 52 52 52 52 52 43 43 43 38 38 32 32 52 52 52 52 52 57 47 43 43 37 43 43 43 43 48 57 50 57 43 43 43 43 42 43 43 43 44 47 47 42 43 37 32 30 30 42 41 39 37 42 32 30 30 32 32 16 16 15 17 17 30 41 48 68 68 68 68 68 68 68 68 68 68 54 57 47 46 46 48 59 59 59 59 57 57 48 48 48 48 48 42 42 47 47 47 42 48 48 48 39 37 34 34 23 21 15 12 11 12 15 15 11 11 11 12 10 8 10 8 9 10 8 10 11 11 11 11 9 10 9 9 9 10 10 12 12 12 12 12 12 26 15 13 9 8 6 6 8 8 8 8 16 25 27 16 21 11 11 11 11 8 15 8 10 8 8 13 11 8 8 8 8 8 8 11 12 12 12 10 9 9 9 9 9 10 10 10 11 16 16 20 18 11 14 14 14 12 12 9 10 10 17 11 11 11 11 12 11 11 11 12 9 9 8 8 8 10 10 10 10 8 8 8 8 8 10 10 9 9 10 10 16 12 10 9 9 9 9 10 9 10 10 20 15 20 10 11 8 8 8 8 12 15 12 9 9 9 9 10 11 12 11 11 8 8 8 8 10 10 23 19 19 15 9 9 9 9 9 9 11 11 11 11 9 9 8 8 8 10 10 8 8 8 8 8 8 14 11 12 11 19 14 14 14 15 16 11 11 10 10 11 10 12 12 8 8 10 10 10 13 9 8 8 8 8 8 8 9 12 9 9 9 9 9 9 13 8 8 6 6 8 8 15 14 11 10 12 12 11 13 10 13 10 11 10 10 10 10 15 17 20 19 10 9 9 9 9 13 15 22 17 8 6 6 8 12 10 18 23 19 19 10 12 13 19 29 23 22 9 9 9 11 11 8 8 8 8 10 12 11 11 11 10 10 10 10 9 11 11 10 10 10 10 10 11 11 11 9 9 23 22 15 15 12 13 8 8 6 6 8 6 8 8 10 9 9 9 9 9 12 19 8 8 8 8 8 8 8 8 8 8 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no094_d22.g1 MSMg01no094_d22.g1 CHROMAT_FILE:
MSMg01no094_d22.g1 PHD_FILE: MSMg01no094_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:49 2005
         (297 letters)



>mm_chr2_169560202_169560898
          Length = 697

 Score =  520 bits (269), Expect = e-152
 Identities = 291/299 (97%), Gaps = 2/299 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaggaggacagcagcatcctttcatatgagaggtgaatatttaggaagagacagaaata 60
           ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 447 caaggaggacagcagcatcctttcacatgaaaggtgaatatttaggaagagacagaaata 388

                                                                       
Query: 61  tcacggcaagtcagaagccgagctcgagaagtgtctgggggaagccttctagcggagctt 120
           ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 387 tcacggcaagtcagaagccgagctcgagaagtgtctgggagaagccttcgagcggagctt 328

                                                                       
Query: 121 ctgaagtggtaggaagaggggttagctgcccgagagactgtaagatggagcatcaggtaa 180
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 327 ctgaagtggtaggaagaggggttagctgaccgagagactgtaagatggagcatcaggtaa 268

                                                                       
Query: 181 ggaagggcgtggctcaaagaacacctgtgggatgaaggggctggtggggatgcatggtgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggaagggcgtggctcaaagaacacctgtgggatgaaggggctggtggggatgcatggtgc 208

                                                                      
Query: 241 agctggctagtctctctctctctctctct--ctctctctctctctctctctctcacaca 297
           ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 207 agctggcaagtctctctctctctctctctttctctctctctctctctctctctcacaca 149


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space:   198144
Effective search space used:   198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information