Query= MSMg01no095_c04.b1 MSMg01no095_c04.b1 CHROMAT_FILE:
MSMg01no095_c04.b1 PHD_FILE: MSMg01no095_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:03 2005
(656 letters)
>mm_chr2_85684958_85686013
Length = 1056
Score = 1214 bits (628), Expect = 0.0
Identities = 644/652 (98%), Gaps = 5/652 (0%)
Strand = Plus / Minus
Query: 5 gaattccactaatgtcagggatgcagagtgagaccttctatcacaaaatgaaatgaaatg 64
||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 965 gaatttcactaaagtcagggatgcagagtgagaccttctatcaca-----aaatgaaatg 911
Query: 65 aaatgaaatgaaatgaaatgaaatgaaatgaaatgaaatgaaatgaaatgaaataatgaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 aaatgaaatgaaatgaaatgaaatgaaatgaaatgaaatgaaatgaaatgaaataatgaa 851
Query: 125 ataactttcagtgtttacaacatatcatcatcacagtacagtatgggcaaataaacctgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 ataactttcagtgtttacaacatatcatcatcacagtacagtatgggcaaataaacctgc 791
Query: 185 acatgtttttatcactgatctcaaaggaaaataaaattccttgggggatggcacttatgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 acatgtttttatcactgatctcaaaggaaaataaaattccttgggggatggcacttatgc 731
Query: 245 atatctctgagtctctgctgaatgtagaaagtcatttcatgatgtttcttctagaaaaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 atatctctgagtctctgctgaatgtagaaagtcatttcatgatgtttcttctagaaaaca 671
Query: 305 atgcatgattctgagaattaaatacccccttcacacaggcataacagcaggatgaacaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 atgcatgattctgagaattaaatacccccttcacacaggcataacagcaggatgaacaag 611
Query: 365 gggctctgaaacaaatgcaaggaggactcacagtctttcaattagttacagaacattcac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gggctctgaaacaaatgcaaggaggactcacagtctttcaattagttacagaacattcac 551
Query: 425 tcaacaagactgtccatctaagaagaagaaagcttcagcctgctactgacatgtagaaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tcaacaagactgtccatctaagaagaagaaagcttcagcctgctactgacatgtagaaaa 491
Query: 485 caggttagctttctattggggcagttctgggtaatgtaatctactcagagcagattcaca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 caggttagctttctattggggcagttctgggtaatgtaatctactcagagcagattcaca 431
Query: 545 ttggccagtgctgctctgactaccagctcttatagtcaccaggcccttataccacattcc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttggccagtgctgctctgactaccagctcttatagtcaccaggcccttataccacattcc 371
Query: 605 aacaagacaagggccttgttgttttaatttaatttatcattagaatctataa 656
||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aacaagacaagagccttgttgttttaatttaatttatcattagaatctataa 319
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_c04.g1 MSMg01no095_c04.g1 CHROMAT_FILE:
MSMg01no095_c04.g1 PHD_FILE: MSMg01no095_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:03 2005
(556 letters)
>mm_chr2_85607022_85607977
Length = 956
Score = 1036 bits (536), Expect = 0.0
Identities = 551/556 (99%)
Strand = Plus / Plus
Query: 1 catgtataaaaaaacctctgggatcaaatagctgttataaagatctggaagtagctgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtataaaaaaacctctgggatcaaatagctgttataaagatctggaagtagctgatt 260
Query: 61 tgaatgctaggatgaggtttctgctgaaaatttggtaagttgtgttctacaggtatccgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 tgaatgctaggatgaggtttctgctgaaaatttggtaagttgtgttctacaggtatcagt 320
Query: 121 ggcaaataaattttgttttattcccataatcactcaagagttatttgctttatgttacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaaataaattttgttttattcccataatcactcaagagttatttgctttatgttacag 380
Query: 181 gtggggatctatgaaaccacatttttcctacccatccattactgtttagcaatttatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtggggatctatgaaaccacatttttcctacccatccattactgtttagcaatttatgaa 440
Query: 241 acttctgagagaaaaattaagggtttaacttttcttgtatttgtaacaagaaaggctaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acttctgagagaaaaattaagggtttaacttttcttgtatttgtaacaagaaaggctaac 500
Query: 301 gcatgttaaaggaagggagagaaacctgagctacgtgattctctcctaactaaaggagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atatgttaaaggaagggagagaaacctgagctacgtgattctctcctaactaaaggagtg 560
Query: 361 tccactgagaagaacttcccaaagctttgagctgttttgaatatctcacaaactctgtgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccactgagaagaacttcccaaagctttgagctgttttgaatatctcacaaactctgtgg 620
Query: 421 gtggtagacagaaaggggtgttttcatgtccgccagagcaatgaaaagtctcaattattt 480
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 621 gtggtagacagaaaggggtgtttccatgtccgccagaggaatgaaaagtctcaattattt 680
Query: 481 cagttcctatttttccagaatgtgaggttaggtgctttgtaaagaaatatctgacagcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagttcctatttttccagaatgtgaggttaggtgctttgtaaagaaatatctgacagcag 740
Query: 541 attgccatggctgaga 556
||||||||||||||||
Sbjct: 741 attgccatggctgaga 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
