CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAATT
CATATAAGAGCAGAAAGTCATAGGAATGAATTAAAATAGCATCTTTTAGT
TATTTTACAAATATGAATTGATGCCCCATTGTGTATTTGTTGTAATACTA
GCAATTCCAGGGTTTTGATAATGTGCACATTTCTTGATAGTGAAATATAG
CTTGACCAGTGAAGATGATATATTTTAGGAGCTGAGTCCTTTCATTGAAG
AGTCATCCTTATCAACCAACTTTAACTTGTTCTCTCTGCCCTTCCTATGT
GCTGTATCCTTACCCGCACAGGTCCTAAATGTATCACAATTATTTTATGC
TGCCAGGCAAAGTAGGTATCAGAACAATAGTTCATGATGGCCTGTCAAAG
TAGCTCACTGACCACAGCCTATGTGAACTAAGCTTTCTTATGTAGACTTG
TATGAAACACAGTGGTCTTTTTCATATGTGTAACATAGGAACATTATTAA
AAGGTAGCTGTAAGGTACAGGCATATTCTATGTAGGTTATTGTCTAAGAG
CTACTATTGCTGTGATGAAACTTCATGACCATAAGCAACATGGGAAGAAA
CATTTATTTCATCTTATAATTACAGGTAATAATCTATTCCTAAGGGCAAG
TAAGACAGTATCTCACACTGGACAGGAAATTTTCTGTAGAATCTG

CAATGTAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGAGCCCGATTTTT
TATGGGGTTATTTTATTTTCTCGAGTCCACCTTCTTGACTTCTTTATATA
TATTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTGC
CAAACTGTTGGTGGCTTTTTTGTCTCATTTACAGTGTCTTTTGCCTTACA
GAAGCTTTGTAATTTTATGAGGTCCCATTTGTAGATTCTCGATCTTACAG
CACAAGCCATTGCCGTCTTCTTAGAATTGGGAAAAAAACACCCATCGAAG
GAGTTGAAAGGATGGACCATCTAGAGACTGCCATACCCGGAGATCCATCC
CGTAATCCGCATCCAAATGCTGACACCATTGCATACACCAGCTAGATTTT
GCTGAAAGGACCCTCATATAGCTATCTCTTGTGAGGTAATGCCGGGGCCT
GGCAAACACAGAAGTGGATGCTCACAGTCAACTATTGGATGGAACACAGG
GCCTCCAATGGAGGAGTTAGAGAAAGTACCCAAAGAGCTAAAGGGGTCTG
CAACCCTACAGGTGGAACAACAATATGAACTAACCAGAACCCCAGAGCTC
TGGACTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATT

Query= MSMg01no095_g01.b1 MSMg01no095_g01.b1 CHROMAT_FILE:
MSMg01no095_g01.b1 PHD_FILE: MSMg01no095_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:22 2005
         (654 letters)



>mm_chr2_41395519_41396572
          Length = 1054

 Score =  675 bits (349), Expect = 0.0
 Identities = 400/417 (95%), Gaps = 2/417 (0%)
 Strand = Plus / Minus

                                                                       
Query: 239 tgttctctctgcccttcctatgtgctgtatccttacccgcacaggtcctaaatgtatcac 298
           ||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||
Sbjct: 707 tgttctctctgcccttcctatgtgctgtatctttaactgcacaggtcctaaatgtatcac 648

                                                                       
Query: 299 aattattttatgctgccaggcaaagtaggtatcagaacaatagttcatgatggcctgtca 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aattattttatgctgccaggcaaagtaggtatcagaacaatagttcatgatggcctgtca 588

                                                                       
Query: 359 aagtagctcactgaccacagcctatgtgaactaagctttcttatgtagacttgtatgaaa 418
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 587 aagtagctcactgaccacagcctatgtgaactaagttttcttatgtagacttgtataaaa 528

                                                                       
Query: 419 cacagtggtctttttcatatgtgtaacataggaacattattaaaaggtagctgtaaggta 478
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 527 cacagtggtctttttcatatgtgtaacataggaacattattaaaaggttgctgtaaggta 468

                                                                       
Query: 479 caggcatattctatgtaggttattgtctaagagctactattgctgtg-atgaaacttcat 537
           |||||||||| ||||||||||||| ||||||||||||| |||||| | || ||||| |||
Sbjct: 467 caggcatattatatgtaggttattatctaagagctactgttgctg-gaataaaactccat 409

                                                                       
Query: 538 gaccataagcaacatgggaagaaacatttatttcatcttataattacaggtaataatcta 597
           ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 408 gaccataagcagcatgggaagaaatatttatttcatcttataattacaggtaataatcta 349

                                                                    
Query: 598 ttcctaagggcaagtaagacagtatctcacactggacaggaaattttctgtagaatc 654
           |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 348 ttcctaagggcaagtaagacaggatctcacactggacaggaaattgtctgtagaatc 292


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)