Query= MSMg01no095_i10.b1 MSMg01no095_i10.b1 CHROMAT_FILE:
MSMg01no095_i10.b1 PHD_FILE: MSMg01no095_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:34 2005
(558 letters)
>mm_chr2_94716519_94717476
Length = 958
Score = 1002 bits (518), Expect = 0.0
Identities = 545/554 (98%)
Strand = Plus / Plus
Query: 5 gaattctcacagttgccagcttttgttgtgaaaaccttaatttaaaacttcttaatttaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcacagttgccagcttttgttgtgaaaaccttaatttaaaacttcttaatttaa 264
Query: 65 aactattgattaaataaaaatgactacagccaattactagaaggattagaagtaggtggg 124
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 265 aactattgattaaataaaaatgactatagccaattactagagggattagaagtaggtggg 324
Query: 125 ttttgaattacctgtttgagggggaagaggagaaggtagaaagaggataaggtgctatgg 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 325 ttttgaattacctgtttgagggggaagaggagaaggtagaaagaggataaggtgttatgg 384
Query: 185 gataggtgcatcatgaagacattgccatgagggttaagcaattggagtaagagtgaccca 244
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 385 gataggtgcatcatgaagatatggccatgagggttaagcaattggagtaagagtgaccca 444
Query: 245 ggtggaacatgtcaaattataactcagggttattgatagggaagtacataataatagtgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggtggaacatgtcaaattataactcagggttattgatagggaagtacataataatagtgt 504
Query: 305 agagggtagatatctgcccagctctactgctttttgaaaggcttatcataaatataaaga 364
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 505 agagggtagatatctgcccagctctagtgctttttgaaaggcttatcataaatataaaga 564
Query: 365 ttttgtgtttgttatctgggaactgaatgatctgaggtggggtagaaacccccaactaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttttgtgtttgttatctgggaactgaatgatctgaggtggggtagaaacccccaactaaa 624
Query: 425 tattgtcagcagcagtagatagaccactgcctttgtgttccacacttgggcatggcctcc 484
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 625 tattgtcggcagcagtagatagaccactgccttcgtgttccacacttgggcatggcctcc 684
Query: 485 cttgtctgggtgaaaacattcagtggacagggatcaggagaagaggattttggagtgagt 544
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 685 cttgtctgggtgaaaacattcagtggatagggatcaggagaagaggattttggagtgagt 744
Query: 545 ttgagatgtaaagt 558
||||||||||||||
Sbjct: 745 ttgagatgtaaagt 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_i10.g1 MSMg01no095_i10.g1 CHROMAT_FILE:
MSMg01no095_i10.g1 PHD_FILE: MSMg01no095_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:34 2005
(468 letters)
>mm_chr2_94796530_94797400
Length = 871
Score = 880 bits (455), Expect = 0.0
Identities = 466/471 (98%), Gaps = 3/471 (0%)
Strand = Plus / Minus
Query: 1 accctgtagaacaggctggcctcaaactcagagatctacctgcttctgcctctgaatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 accctgtagaacaggctggcctcaaactcagagatctacctgcttctgcctctgaatgct 703
Query: 61 gggactaaagttgtgtgccaccacttcccagataggaaccctttaaataaacagagaatt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 702 gggactaaagttgtgtgccaccacttcccagataggaaccctttaaataaacagagaagt 643
Query: 121 tacattttcatcatctataacatggctgaacctctcttctcttggttacattttcatcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tacattttcatcatctataacatggctgaacctctcttctcttggttacattttcatcat 583
Query: 181 ctataacatggctgaacctctcttctcttgggtcctttcttactg---tttttttttaat 237
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 582 ctataacatggctgaacctctcttctcttgggtcctttcttactgttttttttttttaat 523
Query: 238 agacatccacaaagtcccagtgaattgatcttaataagggattgaataaaaatcccacag 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 agacatccacaaagtcccagtgaattgatcttaataagggattgaataaaaatcccacag 463
Query: 298 gaagcttttatactctattagaattatgaatgaggcagaaaacaagggttaaagtcccag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gaagcttttatactctattagaattatgaatgaggcagaaaacaagggttaaagtcccag 403
Query: 358 tgttatgagaaaatgtcttagaggaattacttatttgtattagaaagtggaatccaggga 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tgttatgagaaaatgtcttagaggaattacttatttgtattagaaagtggaatccaggga 343
Query: 418 gattaataccctcatagttacagttatttggggaattgaattgtgtgtgtg 468
||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 342 gattaataccctcatagttacagttatttggggaattgaattgtgagtgtg 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 871
Length adjustment: 10
Effective length of query: 458
Effective length of database: 861
Effective search space: 394338
Effective search space used: 394338
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
