Query= MSMg01no096_l01.b1 MSMg01no096_l01.b1 CHROMAT_FILE:
MSMg01no096_l01.b1 PHD_FILE: MSMg01no096_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:08 2005
(330 letters)
>mm_chr2_31515949_31516678
Length = 730
Score = 536 bits (277), Expect = e-157
Identities = 317/343 (92%), Gaps = 22/343 (6%)
Strand = Plus / Plus
Query: 4 gaattccaggacagtttccc----ctatacagagaaaccctgtcttgaaacacacacaca 59
|||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 190 gaattccaggacag----ccagggctatacagagaaaccctgtcttgaaacacacacaca 245
Query: 60 cacacacacacacacacac--------------atctatatatatataactgtacatgac 105
||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 246 cacacacacacacacacacacacatatatatatatatatatatatataactgtacatgac 305
Query: 106 ttgctacagaccggcctcatccacaacacatcaggcatgtggcatacaagaagttgccaa 165
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 306 ttgctacagaccggcctcatccacaacacgtcaggcatgtggcatacaagaagttgccaa 365
Query: 166 agccttacacaagtgcagtgcccatctgtgtagaagttaagtccagttcttcctcccagc 225
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 366 agccttagacaagtgcagtgcccctctgtgtagaagttaagtccagttcttcctcccagc 425
Query: 226 cccacgctcccagaaataagactcagacttaaaatatatttacaaataccttgaccatat 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cccacgctcccagaaataagactcagacttaaaatatatttacaaataccttgaccatat 485
Query: 286 agctaggctgtactctttctagatcataacccaaactaaccca 328
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 agctaggctgtactctttctagatcataacccaaactaaccca 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_l01.g1 MSMg01no096_l01.g1 CHROMAT_FILE:
MSMg01no096_l01.g1 PHD_FILE: MSMg01no096_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:08 2005
(142 letters)
>mm_chr2_31684615_31685160
Length = 546
Score = 192 bits (99), Expect = 1e-53
Identities = 132/145 (91%), Gaps = 4/145 (2%)
Strand = Plus / Minus
Query: 1 ggtatggtgatcatggaatgaaactctgaaacatgaattccatggatccagagtccttgc 60
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ggtacggtgatcacggaatgaaactctgaaacatgaattccatggatccagagtccttgc 286
Query: 61 ttatggaaat----gggggtgccatgtggaaaggatgctgcttggtgctctttgccattg 116
|||||||||| ||||| | ||||||| ||||||||||||||| ||||||||||||||
Sbjct: 285 ttatggaaatggggggggggggcatgtgggaaggatgctgcttggggctctttgccattg 226
Query: 117 gacagacctcggtttagatgcttca 141
|||||||||||| ||||||||||
Sbjct: 225 gacagacctcggggcagatgcttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 142
Length of database: 546
Length adjustment: 8
Effective length of query: 134
Effective length of database: 538
Effective search space: 72092
Effective search space used: 72092
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
