Query= MSMg01no098_o10.b1 MSMg01no098_o10.b1 CHROMAT_FILE:
MSMg01no098_o10.b1 PHD_FILE: MSMg01no098_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:09 2005
(145 letters)
>mm_chr2_151260237_151260785
Length = 549
Score = 238 bits (123), Expect = 1e-67
Identities = 141/149 (94%), Gaps = 4/149 (2%)
Strand = Plus / Plus
Query: 1 agtgaaaacagggaatgtattgtcatgtaagccaattactttataaatgtaattaacaaa 60
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 agtgaaaacagtgaatgtattgtcatgtaagccaattactttataaatgtaattaagaaa 260
Query: 61 tggcagtcatggggaaaggtagccttttaaaatcaatgagttggtttttttttttttt-- 118
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 tggcagtcatggggaaaggtagccttttaaaatcaatgagttgttttttttttttttttt 320
Query: 119 --caaaagtaactacctgcgcttactggt 145
|||||||||||||||| ||||||||||
Sbjct: 321 ttcaaaagtaactacctgtgcttactggt 349
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 145
Length of database: 549
Length adjustment: 8
Effective length of query: 137
Effective length of database: 541
Effective search space: 74117
Effective search space used: 74117
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no098_o10.g1 MSMg01no098_o10.g1 CHROMAT_FILE:
MSMg01no098_o10.g1 PHD_FILE: MSMg01no098_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:09 2005
(385 letters)
>mm_chr2_151434086_151434870
Length = 785
Score = 731 bits (378), Expect = 0.0
Identities = 381/382 (99%)
Strand = Plus / Minus
Query: 4 tttctttgtggataaaatggtgacagtctccctaaggcattttccatcctctgcttctga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tttctttgtggataaaatggtgacagtctccctaaggcattttccatcctctgcttctga 526
Query: 64 gaccactttaagcccctttctggtattggggattggtgctggcataagtaatggtgagaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gaccactttaagcccctttctggtattggggattggtgctggcataagtaatggtgagaa 466
Query: 124 cccaggatcttaaaagccaaggcccaaagaggagagagaaaccaggggctggcatgccac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cccaggatcttaaaagccaaggcccaaagaggagagagaaaccaggggctggcatgccac 406
Query: 184 cattatcctcttcctgtgctgctcaggagaaggaggggcaggagaggagctgcagagctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cattatcctcttcctgtgctgctcaggagaaggaggggcaggagaggagctgcagagctt 346
Query: 244 gacagttctatcagtcaggaagcgcaggggaagccatatgcagggctgctggggggcctc 303
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gacagctctatcagtcaggaagcgcaggggaagccatatgcagggctgctggggggcctc 286
Query: 304 catctgccaggagtcatttgctaggttggctaccaagctcaagttggcaccatgacccct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 catctgccaggagtcatttgctaggttggctaccaagctcaagttggcaccatgacccct 226
Query: 364 ctgttcacacacctttccctag 385
||||||||||||||||||||||
Sbjct: 225 ctgttcacacacctttccctag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
