Query= MSMg01no099_h21.b1 MSMg01no099_h21.b1 CHROMAT_FILE:
MSMg01no099_h21.b1 PHD_FILE: MSMg01no099_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:00 2005
(410 letters)
>mm_chr2_131705647_131706456
Length = 810
Score = 777 bits (402), Expect = 0.0
Identities = 408/410 (99%)
Strand = Plus / Plus
Query: 1 acaaccttgaaggtggatcaacaaggggttcttgagatggttcagctggtaaaggcacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaaccttgaaggtggatcaacaaggggttcttgagatggttcagctggtaaaggcacct 260
Query: 61 gctcctgagcctacgggctgagttcagtgtctgggattcacaagatggaaggagagagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctcctgagcctacgggctgagttcagtgtctgggattcacaagatggaaggagagagca 320
Query: 121 gctcctgaaagttgacctctgacctccacacactgaagaaacaaaaggtcctcgtgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctcctgaaagttgacctctgacctccacacactgaagaaacaaaaggtcctcgtgtttt 380
Query: 181 ctctccacatgattaatcttaatttaagcaggttttattcccttacttcttttttaactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctccacatgattaatcttaatttaagcaggttttattcccttacttcttttttaactg 440
Query: 241 ccttttgaagatgtattttatttagctatagaacctgagctcaaagtcaacactctctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccttttgaagatgtattttatttagctatagaacctgagctcaaagtcaacactctctgg 500
Query: 301 cctcagccgcctgagttctgcagtgtggagagccagagctgtctttgaagactgagaatt 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 cctcagccgcctgagttctgcagtgtggagagccagagatgtctttgaagactgagaatt 560
Query: 361 cagaagtcacctcttttgtaatgcctgttcttggttatcagctatacctg 410
||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 cagaagtcacctcttttgtaatggctgttcttggttatcagctatacctg 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no099_h21.g1 MSMg01no099_h21.g1 CHROMAT_FILE:
MSMg01no099_h21.g1 PHD_FILE: MSMg01no099_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:00 2005
(351 letters)
>mm_chr2_131877420_131878169
Length = 750
Score = 578 bits (299), Expect = e-169
Identities = 321/329 (97%), Gaps = 3/329 (0%)
Strand = Plus / Minus
Query: 24 ttcttaagaaacagagcccccgacacacatacagcaggggactgctgggtctggccgcag 83
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 750 ttcttaagaaacagagcccccgacacacatacagcagaggactgctgggtctggccgcag 691
Query: 84 taggagaagactcgagcctaaccctcaagagacttgagaccccagggagtggggagggct 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 taggagaagactcgagcctaaccctcaagagacttgagaccccagggagtggggagggct 631
Query: 144 ggtgggatggggatagggcatcctcttagaaacaggcaacaactggataggaaaaaaata 203
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 630 ggtgggatggggatagggcatcctctcagaaacaggcaacaactggataggaaaaaaata 571
Query: 204 aaagtaattttttttaaaaagccaatgagattgggg-aaaaagcttatatattaatttat 262
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 570 aaagtaattttttttaaaaagccaatgagattgggggaaaaagc--atatattaatttat 513
Query: 263 tacatataccatagttaatatacatataatctatatatgtgtgtgaatttattaaatcag 322
||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 512 tacatatacaacagttaatatacatataaactatatatgtgtgtgaatttattaaatcag 453
Query: 323 cttacgttagttgctctgtccttgaggct 351
|||||||||||||||||||||||||||||
Sbjct: 452 cttacgttagttgctctgtccttgaggct 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 750
Length adjustment: 9
Effective length of query: 342
Effective length of database: 741
Effective search space: 253422
Effective search space used: 253422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
