Query= MSMg01no102_d06.b1 MSMg01no102_d06.b1 CHROMAT_FILE:
MSMg01no102_d06.b1 PHD_FILE: MSMg01no102_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:43 2005
(294 letters)
>mm_chr2_27588820_27589513
Length = 694
Score = 538 bits (278), Expect = e-157
Identities = 290/294 (98%)
Strand = Plus / Minus
Query: 1 tgtgcctcaaggacagacaaaggatagaaagtccatcttcacaaggaagctgcccatcat 60
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tgtgcctcatggatagacaaaggatagaaagtccatcttcacaaggaagctgcccatcat 435
Query: 61 cccacacacagcatgggcagctggcactgccgtccaggaagggtgagcggaagaggggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cccacacacagcatgggcagctggcactgccgtccaggaagggtgagcggaagaggggca 375
Query: 121 aaactgaccacactgtgaatgcttggaggtttaagtaacaagccagcacagagcagagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aaactgaccacactgtgaatgcttggaggtttaagtaacaagccagcacagagcagagat 315
Query: 181 agactgtcccagcccagcacctagggccattccctagtcctcaaagggtgggtgacacta 240
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 314 agactgtcccagcccagcacccaggaccattccctagtcctcaaagggtgggtgacacta 255
Query: 241 ataaaactgaaatactgaatgctgaaatattggtgacacctctggtgacttcaa 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ataaaactgaaatactgaatgctgaaatattggtgacacctctggtgacttcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_d06.g1 MSMg01no102_d06.g1 CHROMAT_FILE:
MSMg01no102_d06.g1 PHD_FILE: MSMg01no102_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:43 2005
(132 letters)
>mm_chr2_27467281_27467809
Length = 529
Score = 209 bits (108), Expect = 5e-59
Identities = 126/132 (95%), Gaps = 3/132 (2%)
Strand = Plus / Plus
Query: 1 ggagacgcctggagtctacaacaagcagaaagttgagagttgataagtcgcgaatactga 60
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 201 ggagacgcctggagtctacaacaagcagaaagttgagagttgataagt-gtgaatactga 259
Query: 61 aatgaagatctgaacaggtttaatcagtgggctagaggacattttcagtgagcggagagt 120
|||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 260 aatgaagatctgaacaggtttaat-agcgggctagaggacatttt-agtgagcggagagt 317
Query: 121 ggggaggagcca 132
|||||||||||
Sbjct: 318 agggaggagcca 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 132
Length of database: 529
Length adjustment: 8
Effective length of query: 124
Effective length of database: 521
Effective search space: 64604
Effective search space used: 64604
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
