Query= MSMg01no103_j13.b1 MSMg01no103_j13.b1 CHROMAT_FILE:
MSMg01no103_j13.b1 PHD_FILE: MSMg01no103_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:34 2005
(269 letters)
>mm_chr2_80875647_80876316
Length = 670
Score = 484 bits (250), Expect = e-141
Identities = 262/266 (98%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 5 gaattctaatt-tacttcccctcagaagatgttactttacgttgcagaaaaggcctatgg 63
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaattatatttcccctcagaagatgttactttacgttgcagaaaaggcctatgg 264
Query: 64 tattctttaagcgcttaatctgacaattccaactaaatagctcaactcaattgagttaaa 123
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tattctttaagtgcttaatctgacaattccaactaaatagctcaactcaattgagttaaa 324
Query: 124 cttggagcttcttattttataggcttgtaactttatagcttaaatagagggatgaaacta 183
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 325 cttggagcttcttattttataggctcgtaactttatagcttaaatagagggatgaaacta 384
Query: 184 gtgaacataagcatgtgtgagaatgagactttcaggttgatgatttgattttggagatct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgaacataagcatgtgtgagaatgagactttcaggttgatgatttgattttggagatct 444
Query: 244 ttgagatggttgagtaggtgaagatg 269
||||||||||||||||||||||||||
Sbjct: 445 ttgagatggttgagtaggtgaagatg 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 670
Length adjustment: 9
Effective length of query: 260
Effective length of database: 661
Effective search space: 171860
Effective search space used: 171860
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no103_j13.g1 MSMg01no103_j13.g1 CHROMAT_FILE:
MSMg01no103_j13.g1 PHD_FILE: MSMg01no103_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:34 2005
(248 letters)
>mm_chr2_81040791_81041438
Length = 648
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Minus
Query: 1 gtctagtaagttcttaaataaattactcaattatatttgagattaaatatttatttagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gtctagtaagttcttaaataaattactcaattatatttgagattaaatatttatttagcc 498
Query: 61 aagtgaattataatgctactaataaataatatttatttgtattaataaagctatacattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aagtgaattataatgctactaataaataatatttatttgtattaataaagctatacattg 438
Query: 121 catttatgtatatgtaaatagttttcttataaagtgggaaagaaaatactatttatgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 catttatgtatatgtaaatagttttcttataaagtgggaaagaaaatactatttatgaga 378
Query: 181 aattatcacttatatcatgtttttataatagccatcttatattttcttattaatgttagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aattatcacttatatcatgtttttataatagccatcttatattttcttattaatgttagg 318
Query: 241 gactagga 248
||||||||
Sbjct: 317 gactagga 310
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
