ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCTCAGATGCCGATTATACTAGGTTCAGTCTACCAGGAGAGCACATAG
CATTATCATTAGAAATCATTTCACTGATTTTTTTTCCAAGTTGTGTTTAG
TTCTATCCTAGGTCTCTGGGGTATCTATCTGGCCTCTGTTTCTTGGAGCC
AGGCAGTGGTAGGCATGTGCTTCCTCTCATGGAATGGATCACAACTTGGA
GCAATCATTGATTGGCCACTCGCAAGTGTTCTGTGCCACCTTTACTCAGC
ATACCTTGCAGGCAGAACAGATTATAGTTTAAAGATTTTGTGGGTGGATT
GGTGTTCTGGTCTCTCCCCTCGAAGTCTTTCCTGATTACAGAAGATGGCT
TGCTCAGACCTCTTTGCCTCCTTTACTCTGAGTCTTTGCTAGAGTCACTC
TCTTAGATTCCAGGGACTTTCTACTGCACTAGATTTCTACCTTATCCTGA
AATGCACCCCAGTTCCACCCATCTCTCTTAATATTCTTCCTCACCCACCA
CCTGATCCCTCTTGTTTCCATATCCACTCCTCGTCTACACTCTATTTCAG
AGGGCCTATAGAGAGCTGCTGTAGGTCCTCTGCATATTTATTATGGTTAT
GTAGGTTGGGTGTTCATGTGGGCCCTCCTAATAGTGTGATCATAGGTTGT
CTCCTATCCTTTTGCC

ATGCAGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTATCATCCTTTTTTAATGTTAGTCTGTCCA
GAGCTACTCAAGTTGAAATTAAACAGGCAATCTATTGGACAAGTTCTTTT
CAAAAAATATTTACATATGAAGAAACAGCAAGAAAATAATAATGTTATTG
GGTAGATGTTGCTTAAATATATGGTAATCAAACTATTGTAACAAAAGACC
TTATACCAAAAACTCAATACATTTTGTTATTTTAAAAAATTTTGAAAAAT
GAATTAATTTCAATTCTCCTGTAAAACAGTCACACAAACCAACCCAAGCC
AAAACAAAAACAAAAACAAAACAAAAATTCAAAAACACAGATAAACTATA
ATATATGTATATATATGTGTATACATCCTTCAATTACTGCTGTAAAAATT
AAGGTGATCTGAATATTTTAAAAAGAAAGATGTTTATTTAACTAAAAATT
TTAGACTAGGTAATGCCACAGAGCATTGTACTTACAAGGTTCTTTCTGGA
TCTATCACATTGCAGCAGACAGCATCACCATAGGAGAAAGAGATTGCCTT
AATGTATAGAAAATCTGAGCCTAGCCTGTGGGTGGAAAACTAACCACTAA
ACCAGTCTTAGCAGGAGAGACATGTTAGCTCCTCCTGAAACCAGGTTCCA
AGAACCCAGTTCTA

Query= MSMg01no104_g14.g1 MSMg01no104_g14.g1 CHROMAT_FILE:
MSMg01no104_g14.g1 PHD_FILE: MSMg01no104_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:40 2005
         (500 letters)



>mm_chr2_81529434_81530334
          Length = 901

 Score =  948 bits (490), Expect = 0.0
 Identities = 499/502 (99%), Gaps = 2/502 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttatcatcctttttt-aatgttagtctgtccagagctactcaagttgaaattaaacaggc 59
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttatcatccttttttaaatgttagtctgtccagagctactcaagttgaaattaaacaggc 259

                                                                       
Query: 60  aatctattggacaagttcttttcaaaaaatatttacatatgaagaaacagcaagaaaata 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aatctattggacaagttcttttcaaaaaatatttacatatgaagaaacagcaagaaaata 319

                                                                       
Query: 120 ataatgttattgggtagatgttgcttaaatatatggtaatcaaactattgtaacaaaaga 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ataatgttattgggtagatgttgcttaaatatatggtaatcaaactattgtaacaaaaga 379

                                                                       
Query: 180 ccttataccaaaaactcaatacattttgttattttaaaaaattttgaaaaatgaattaat 239
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccttataccaaaaaatcaatacattttgttattttaaaaaattttgaaaaatgaattaat 439

                                                                       
Query: 240 ttcaattctcctgtaaaacagtcacacaaaccaacccaagccaaaacaaaaacaaaaaca 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttcaattctcctgtaaaacagtcacacaaaccaacccaagccaaaacaaaaacaaaaaca 499

                                                                       
Query: 300 aaacaaaaattcaaaaacacagataaactataatatatgtatatatatgtgtatacatcc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaacaaaaattcaaaaacacagataaactataatatatgtatatatatgtgtatacatcc 559

                                                                       
Query: 360 ttcaattactgctgtaaaaattaaggtgatctgaatattttaaaaagaaa-gatgtttat 418
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 560 ttcaattactgctgtaaaaattaaggtgatctgaatattttaaaaagaaaagatgtttat 619

                                                                       
Query: 419 ttaactaaaaattttagactaggtaatgccacagagcattgtacttacaaggttctttct 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttaactaaaaattttagactaggtaatgccacagagcattgtacttacaaggttctttct 679

                                 
Query: 479 ggatctatcacattgcagcaga 500
           ||||||||||||||||||||||
Sbjct: 680 ggatctatcacattgcagcaga 701


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 901
Length adjustment: 10
Effective length of query: 490
Effective length of database: 891
Effective search space:   436590
Effective search space used:   436590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)