Query= MSMg01no104_i05.b1 MSMg01no104_i05.b1 CHROMAT_FILE:
MSMg01no104_i05.b1 PHD_FILE: MSMg01no104_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:48 2005
(248 letters)
>mm_chr2_180188408_180189055
Length = 648
Score = 456 bits (236), Expect = e-133
Identities = 245/248 (98%)
Strand = Plus / Plus
Query: 1 caattcctttagtctggtgtctgaactttttcttggctgctaacgggaacctgcatatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 caattcctttagtctggtgtctgaactttttcttggctgctaacgggaacctggatatac 260
Query: 61 actgcatagagatctcagtccagtcaatctctgggacttcctggtctttagtcacaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgcatagagatctcagtccagtcaatctctgggacttcctggtctttagtcacaggaa 320
Query: 121 ataccaagaaccttgaggagccaggcacagcctgagaaaatgagggtctccagaccccca 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 ataccaagaaccttgaggagccaggcacagtctgagaaaatgagggtctccagaccccca 380
Query: 181 ggtatcatgaggcccccagagggcctgggcatgtgacttggcttctgagggcaggacaag 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 ggtatcatgaggcccccagagggcctgggtatgtgacttggcttctgagggcaggacaag 440
Query: 241 gcctgtgc 248
||||||||
Sbjct: 441 gcctgtgc 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no104_i05.g1 MSMg01no104_i05.g1 CHROMAT_FILE:
MSMg01no104_i05.g1 PHD_FILE: MSMg01no104_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:48 2005
(244 letters)
>mm_chr2_180291844_180292487
Length = 644
Score = 412 bits (213), Expect = e-119
Identities = 230/243 (94%), Gaps = 12/243 (4%)
Strand = Plus / Minus
Query: 1 atgagcttgtgacccgtggttgagattcttggggttgtgtgacacagcaccaatcaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 318 atgagcttgtgacccgtggttgagattcttggggttgtgtgacacagcaccaatcagaag 259
Query: 61 ccttaaaccaataggagtatattctttgttttttccttcttctttttaaaaagattcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ccttaaaccaataggagtatattctttgttttttccttcttctttttaaaaagattcatt 199
Query: 121 tattttactttgtatgtagatgttttgcctgcgtgcatgtgcgtatgttacaccacacgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tattttactttgtatgtagatgttttgcctgcgtgcatgtgcgtatgttacaccacacgc 139
Query: 181 atgcctggtgcttaaggaggtcagaagaagccattaggttctgatcctgtgaattggagt 240
||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 138 atgcctggtgc------------gaagaagccattaggttctgatcctgtgaattggagt 91
Query: 241 taa 243
|||
Sbjct: 90 taa 88
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
