Query= MSMg01no105_l12.b1 MSMg01no105_l12.b1 CHROMAT_FILE:
MSMg01no105_l12.b1 PHD_FILE: MSMg01no105_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:26 2005
(235 letters)
>mm_chr2_35400709_35401342
Length = 634
Score = 406 bits (210), Expect = e-118
Identities = 227/234 (97%), Gaps = 3/234 (1%)
Strand = Plus / Plus
Query: 5 gaattctctccagttccttcccttcccaacactacacttgattcgggccatatgtagggc 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctccagctccttcccttcccaacactacacttgattcgggccatatgtagggc 264
Query: 65 agggccccatggtaacccagagcctgtctgcctggatcatctcctctctcctgtgccagg 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agggccccatgggaacccagagcctgtctgcctggatcatctcctctctcctgtgccagg 324
Query: 125 acctggggcacccagcaggcactcacatgtccctgcactgtgtaagaaggctggagagca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acctggggcacccagcaggcactcacatgtccctgcactgtgtaagaaggctggagagca 384
Query: 185 gtcactggcggctgtggttggaatggggggcgcgtggg---ggggaggctgggg 235
|||||||||||||||||||||||||||||||||| ||| |||||| ||||||
Sbjct: 385 gtcactggcggctgtggttggaatggggggcgcgggggtggggggagactgggg 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 634
Length adjustment: 9
Effective length of query: 226
Effective length of database: 625
Effective search space: 141250
Effective search space used: 141250
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no105_l12.g1 MSMg01no105_l12.g1 CHROMAT_FILE:
MSMg01no105_l12.g1 PHD_FILE: MSMg01no105_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:27 2005
(231 letters)
>mm_chr2_35522887_35523517
Length = 631
Score = 431 bits (223), Expect = e-125
Identities = 229/231 (99%)
Strand = Plus / Minus
Query: 1 gagtcgatttgcatagcctctgatatggggcctagaaatacccaaggctacttgggggag 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 431 gagtcgatttgcatagcctctgatatggggcctagaaataggcaaggctacttgggggag 372
Query: 61 agcagtcccatggtacccccgaggctggctgtcaccaggacctgggctctacatagcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agcagtcccatggtacccccgaggctggctgtcaccaggacctgggctctacatagcaag 312
Query: 121 tgaggctgagagggagtcaaagggctggggcttggtaagttacccccaagaagttaggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tgaggctgagagggagtcaaagggctggggcttggtaagttacccccaagaagttaggca 252
Query: 181 gcttgttcacaaattgagccagcatgtttacatgcccagacagaactgcat 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gcttgttcacaaattgagccagcatgtttacatgcccagacagaactgcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
