Query= MSMg01no110_f05.b1 MSMg01no110_f05.b1 CHROMAT_FILE:
MSMg01no110_f05.b1 PHD_FILE: MSMg01no110_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:53 2005
(522 letters)
>mm_chr2_17326094_17327015
Length = 922
Score = 963 bits (498), Expect = 0.0
Identities = 513/518 (99%)
Strand = Plus / Minus
Query: 5 gaattcagtgctctctctgccctccatgggcatcatatatgctgtgcatgtgtacacaga 64
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 814 gaattcagtgctctctctgccctccatgggcatcacatatgctgtgcatgtatacacaga 755
Query: 65 gacaaaacactcatacatataaaatgaaaatacataaatctttaaaaataaaataggggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 gacaaaacactcatacatataaaatgaaaatacataaatctttaaaaataaaataggggt 695
Query: 125 tatcattgattttcaaatgtataattcaaatgcttgaatttatcactgtacctaaagatg 184
|||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||
Sbjct: 694 tatcattgattttcaaatgtataattcaaatgctagaatttatcgccgtacctaaagatg 635
Query: 185 ttaaaacattcctgaaaggcaaggtttgttatagatttagttcctccccaacaggatcac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ttaaaacattcctgaaaggcaaggtttgttatagatttagttcctccccaacaggatcac 575
Query: 245 cataggcatcccccattcatttctcatgtgaacttcaggcttcacatatgatatataagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 cataggcatcccccattcatttctcatgtgaacttcaggcttcacatatgatatataagt 515
Query: 305 tcttaattatggactacctcccagctgttgctgtgaacccttattatagaaggacccacc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tcttaattatggactacctcccagctgttgctgtgaacccttattatagaaggacccacc 455
Query: 365 acattatgacaaggttatcctacagtgtagcttcatccttatgaacatctatataagtag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 acattatgacaaggttatcctacagtgtagcttcatccttatgaacatctatataagtag 395
Query: 425 taaagaaatattctcagtgttcaagtcatgaagcaacagaacacccattttctattttaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 taaagaaatattctcagtgttcaagtcatgaagcaacagaacacccattttctattttaa 335
Query: 485 aattgcttctcacagactcttgaaaggctgactttgaa 522
||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aattgcttctcacagactcttgaaaggctgactttgaa 297
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_f05.g1 MSMg01no110_f05.g1 CHROMAT_FILE:
MSMg01no110_f05.g1 PHD_FILE: MSMg01no110_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:53 2005
(382 letters)
>mm_chr2_17184399_17185180
Length = 782
Score = 683 bits (353), Expect = 0.0
Identities = 378/399 (94%), Gaps = 21/399 (5%)
Strand = Plus / Plus
Query: 1 tgctttgaaataatctcttctagaaatggctgaataaataagactggaacaactgcaacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgctttgaaataatctcttctagaaatggctgaataaataagactggaacaactgcaacg 260
Query: 61 tggactccgaggagagttacttaggatcctacccctagacaaaaaaagaaaag-----aa 115
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 tggactccgaggagagttacttaggatcctacccctagacaaaaaaagaaaagaaaaaaa 320
Query: 116 aaaaaaaaaaaaactacaggcaactaatgactgctgcagggaggaggctcagcctctcct 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaaaaaaaaaactacaggcaactaatgactgctgcagggaggaggctcagcctctcct 380
Query: 176 aggaaggagcattctgattggttgtctaatccagagctgtcatccttgaaagcatatact 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaaggagcattctgattggttgtctaatccagagctgtcatccttgaaagcatatact 440
Query: 236 cacagaaaatcaaatagggttcaccaggttgtattttaaacactatatatatctacatat 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacagaaaatcaaatagggttcaccaggttgtattttaaacactatatatatctacatat 500
Query: 296 atacatatgta----------------gatatatacatatatatatacatatatatacat 339
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 atacatatgtatatatgtatatatgtagatatatacatatatatatacatatatatacat 560
Query: 340 acacatatatgtagatatatatgtagatatatatgtgtg 378
|||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acacatatatgtagatatatatgtagatatatatgtgtg 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
