MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-110F16
Chromosome	2 (Build37)
Map Location	73,373,467 - 73,373,814
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC383712, LOC635960, LOC100039928, 6430710C18Rik, Sp3, Hspe1-ps5, Gtpbp9, LOC620110, Sp9, 1700023B02Rik, Scrn3, Gpr155, Wipf1
Downstream gene	Chrna1, Chn1, Atf2, Atp5g3, LOC667729, LOC100040172, Lnp
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC383712 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383712
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	LOC635960 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:635960
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 46 ESTs, 20 Proteins

name	LOC100039928 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039928
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	6430710C18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76218 MGI:1923468
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Sp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20687 MGI:1277166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hspe1-ps5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93752 MGI:1935166
definition	gene_synonym : Cpn10-rs6 note : heat shock protein 1 (chaperonin 10), pseudogene 5 pseudo : _no_value

name	Gtpbp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67059 MGI:1914309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC620110 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 152 ESTs, 12 Proteins pseudo : _no_value

name	Sp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381373 MGI:3574660
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700023B02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66935 MGI:1914185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scrn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74616 MGI:1921866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr155 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68526 MGI:1915776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wipf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215280 MGI:2178801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chrna1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11435 MGI:87885
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108699 MGI:1915674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Atf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11909 MGI:109349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Atp5g3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228033 MGI:2442035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667729 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667729
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins pseudo : _no_value

name	LOC100040172 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040172
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Lnp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69605 MGI:1918115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383712 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367032 GeneID:383712
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : similar to putative translation initiation factor A121/Sui1 transcript_id : XM_357202.5

name	LOC635960 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249834 GeneID:635960
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 46 ESTs, 20 Proteins product : similar to adenylate kinase 4 transcript_id : XM_001474672.1

name	6430710C18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249838 GeneID:76218 MGI:1923468
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : RIKEN cDNA 6430710C18 gene transcript_id : XM_001474689.1

name	Sp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124001546 GeneID:20687 MGI:1277166
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trans-acting transcription factor 3 transcript_id : NM_001018042.2

name	Gtpbp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76677912 GeneID:67059 MGI:1914309
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTP-binding protein 9 (putative) transcript_id : NM_025942.2

name	Gtpbp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76677914 GeneID:67059 MGI:1914309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTP-binding protein 9 (putative) transcript_id : NM_030091.1

name	Sp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52693932 GeneID:381373 MGI:3574660
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trans-acting transcription factor 9 transcript_id : NM_001005343.1

name	1700023B02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350084 GeneID:66935 MGI:1914185
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700023B02 gene transcript_id : NM_025854.2

name	Scrn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61969659 GeneID:74616 MGI:1921866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secernin 3 transcript_id : NM_029022.1

name	Gpr155 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123959715 GeneID:68526 MGI:1915776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 155 transcript_id : NM_001080707.1

name	Wipf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130115 GeneID:215280 MGI:2178801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WAS/WASL interacting protein family, member 1 transcript_id : NM_153138.3

name	Chrna1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802554 GeneID:11435 MGI:87885
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle) transcript_id : NM_007389.3

name	Chn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371256 GeneID:108699 MGI:1915674
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chimerin (chimaerin) 1 transcript_id : NM_175752.2

name	Chn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130637 GeneID:108699 MGI:1915674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chimerin (chimaerin) 1 transcript_id : NM_029716.2

name	Atf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68799838 GeneID:11909 MGI:109349
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : activating transcription factor 2 transcript_id : NM_009715.2

name	Atf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68799915 GeneID:11909 MGI:109349
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : activating transcription factor 2 transcript_id : NM_001025093.1

name	Atp5g3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348625 GeneID:228033 MGI:2442035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 3 transcript_id : NM_175015.2

name	LOC100040172 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249826 GeneID:100040172
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040172 transcript_id : XM_001474208.1

name	Lnp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84872192 GeneID:69605 MGI:1918115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : limb and neural patterns transcript_id : NM_027133.2

name	LOC383712 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:63487010 GeneID:383712
definition	codon_start : 1 product : similar to putative translation initiation factor A121/Sui1 protein_id : XP_357202.3

name	LOC635960 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249835 GeneID:635960
definition	codon_start : 1 product : similar to adenylate kinase 4 protein_id : XP_001474722.1

name	6430710C18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249839 GeneID:76218 MGI:1923468
definition	codon_start : 1 product : hypothetical protein LOC76218 protein_id : XP_001474739.1

name	Sp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:65301157 CCDS:CCDS16122.1 GeneID:20687 MGI:1277166
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IDA] [Evidence ISS]; GO:0003690 - double-stranded DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030183 - B cell differentiation [Evidence IMP]; GO:0030218 - erythrocyte differentiation [Evidence IMP]; GO:0030851 - granulocyte differentiation [Evidence IMP]; GO:0030224 - monocyte differentiation [Evidence IMP]; GO:0001779 - natural killer cell differentiation [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence TAS]; GO:0030217 - T cell differentiation [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : trans-acting transcription factor 3 isoform 1 protein_id : NP_001018052.1

name	Gtpbp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313144 CCDS:CCDS16124.1 GeneID:67059 MGI:1914309
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; GTP-binding protein PTD004 product : GTP-binding protein PTD004 isoform a protein_id : NP_080218.1

name	Gtpbp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76677915 CCDS:CCDS16125.1 GeneID:67059 MGI:1914309
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; GTP-binding protein PTD004 product : GTP-binding protein PTD004 isoform b protein_id : NP_084367.1

name	Sp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52693933 CCDS:CCDS16126.1 GeneID:381373 MGI:3574660
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : buttonhead-like zinc finger transcription factor Sp9 product : trans-acting transcription factor 9 protein_id : NP_001005343.1

name	1700023B02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385336 CCDS:CCDS16127.1 GeneID:66935 MGI:1914185
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0042826 - histone deacetylase binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016564 - transcriptional repressor activity [Evidence ISS] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : CBF1 interacting corepressor protein_id : NP_080130.1

name	Scrn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61969660 CCDS:CCDS16128.1 GeneID:74616 MGI:1921866
definition	GO_function : GO:0016805 - dipeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : secernin 3 protein_id : NP_083298.1

name	Gpr155 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123959716 GeneID:68526 MGI:1915776
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 155 protein_id : NP_001074176.1

name	Wipf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346579 CCDS:CCDS16131.1 GeneID:215280 MGI:2178801
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IDA] GO_process : GO:0030048 - actin filament-based movement [Evidence IDA] codon_start : 1 note : WASP interacting protein product : Wiskott-Aldrich syndrome protein interacting protein protein_id : NP_694778.1

name	Chrna1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542391 CCDS:CCDS16132.1 GeneID:11435 MGI:87885
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : acetylcholine receptor alpha; cholinergic receptor nicotinic alpha polypeptide 1 (muscle) product : cholinergic receptor, nicotinic, alpha 1 (muscle) protein_id : NP_031415.2

name	Chn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28461137 CCDS:CCDS16133.1 GeneID:108699 MGI:1915674
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; chimaerin product : chimerin (chimaerin) 1 isoform 1 protein_id : NP_786928.1

name	Chn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386436 GeneID:108699 MGI:1915674
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; chimaerin product : chimerin (chimaerin) 1 isoform 2 protein_id : NP_083992.1

name	Atf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68799916 CCDS:CCDS16134.1 GeneID:11909 MGI:109349
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : activating transcription factor 2 isoform 1 protein_id : NP_001020264.1

name	Atf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468883 CCDS:CCDS16135.1 GeneID:11909 MGI:109349
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : activating transcription factor 2 isoform 2 protein_id : NP_033845.1

name	Atp5g3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27923925 CCDS:CCDS16136.1 GeneID:228033 MGI:2442035
definition	GO_component : GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA] GO_process : GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 3 protein_id : NP_778180.1

name	LOC100040172 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249827 GeneID:100040172
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474258.1

name	Lnp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32441290 CCDS:CCDS16137.1 GeneID:69605 MGI:1918115
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 note : lunapark product : limb and neural patterns protein_id : NP_081409.1

name	LOC100039928 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039928
definition	number : 2 pseudo : _no_value

name	LOC100039928 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039928
definition	number : 1 pseudo : _no_value

name	LOC620110 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249840 GeneID:620110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 152 ESTs, 12 Proteins product : similar to 60S ribosomal protein L7a (Surfeit locus protein 3) pseudo : _no_value transcript_id : XR_031929.1

name	LOC667729 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249824 GeneID:667729
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase pseudo : _no_value transcript_id : XR_031598.1

clone name	MSMg01-414H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169A20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261O24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-149G24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-304K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512P08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-478N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-110F16.T7 (MSMg01no110_f16.b1)	MSMg01-110F16.TJ (MSMg01no110_f16.g1)
ACC	AG323302	AG323303
length	701	746
length of high quality (start - end)	567 (44 - 610)	351 (74 - 424)
definition	CHROMAT_FILE: MSMg01no110_f16.b1 PHD_FILE: MSMg01no110_f16.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:13:55 2005	CHROMAT_FILE: MSMg01no110_f16.g1 PHD_FILE: MSMg01no110_f16.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:13:55 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	ACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA TTCTTTGTTCAGCTCTGTACCCCATTTTTAATGGGGTTATTTGATTTTCT GCAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCCTGT CTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGACCTTTTT GTCTTATTGACAGTGTCTTTTTGCCTTGCAGAAGCTTTGCAATTTTATGA GGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTA TTCAGGAATTTTTCCCCTGTACCCATATCTTCGAGGCTTTTCCCTACTTT CTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAATCC ACTTAGATTTGACCTTAGTACAAAGAGATAGGAATGGATCAATTCGCATT CTTCTACATAATAACCACCAGTTGTGCCAGCACCATTTGTTGAAAATGCT ATCTTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCAAATATCAAATGA ACATACGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTC TACTTGTCTGCCACTATACCAGTACCATACAGTTTTTATCACAATTGATC TGTATGTAGTACAGCTTTAGGTCACGCATGGTGATTTCCCCAGAGATTTT T	TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXTCTTTAAGAGAGCAGTCTTGGGGTGTA GCCATTTGGGAGGAGGGAGCTGCAGTTGCTGGCTTTTATACTTCCAAAAT TTGCACTCAGATGAGAGATGGTTTTGCCACTCCCATGGACCTGAGGCATC CGAGTCCTTGACACGACCATGCCCATATCAAGCAACACGCGTTCACTCAT GATTTCATCTGTTCTTTATACATCGACTCAAGGCTCCTCAGCTCCCCACA AGAAAGAGATTCTTTAAGAGTATCTCAGAAATTGGCCAAAACCATTCAAC CATTCATTACAGGGTCACACACATAAGAGTGAAACCATTTGGAAGTCTCC CTCCCTCCCTCCCTCCCTCCCTCCCTATCTNTCTTTTAATCTCTCTCCTT TACCCTCTCCCGTATTACGTCTTTTTATTCTTCATTTCTCCTCTCCCAAT TTATATGTCCATATCTTCCATCCCTTTTTCACTCTTTCCTTACTGTTTAC TCTCCCCCCCTCTTTTCCGCATATGTCCACAGCTAGGTTTAATGTTATGT GCCTGGCGACCGTACTCTATCTTCTTACTCCCTCGCTTCCTCCCTTGATT CTTACTACTTTTCTCCCTCCTTTTCTTCCCCTCTCTCCCTTCTCACCCCC CCCCCAATTTTTCTCTTCTTACTCCGTTTTCGCTCGCGCCCCTCTT
quality values	Open. Hide. 9 9 9 12 19 30 44 59 41 33 32 32 28 19 19 9 9 9 17 19 37 37 59 30 27 25 15 13 8 6 6 6 6 10 12 31 36 43 33 33 33 33 36 36 47 57 57 36 36 37 37 50 50 59 59 43 23 23 9 9 9 12 23 28 59 57 57 57 57 57 68 51 50 50 50 51 68 68 68 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 50 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 51 51 57 68 57 57 57 57 57 57 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 52 52 52 62 62 62 62 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 57 59 44 57 43 39 39 43 57 43 57 43 43 43 35 35 39 44 43 52 52 52 52 57 57 57 68 57 57 57 57 57 57 57 68 68 57 59 57 57 57 57 57 52 57 57 57 57 57 68 68 68 57 68 57 57 59 52 52 57 57 57 68 68 57 57 57 57 59 52 57 57 57 50 50 43 43 44 57 59 59 54 54 54 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 59 59 59 59 59 59 57 54 54 54 54 54 57 54 54 54 54 54 57 57 54 54 54 59 59 59 59 59 48 48 48 57 43 43 43 43 43 47 47 59 59 59 59 59 59 48 48 48 41 41 47 41 39 39 32 23 23 27 25 25 28 32 35 59 59 59 59 59 59 59 57 57 57 57 39 39 35 35 35 40 59 59 42 39 30 30 28 41 32 35 35 59 59 48 48 43 42 32 30 30 30 25 40 29 36 35 42 42 43 48 48 48 43 43 37 32 24 20 17 26 30 17 19 19 24 24 37 39 40 40 23 20 18 17 15 16 28 25 25 25 34 36 47 37 24 19 13 10 12 10 10 10 17 19 13 14 14 16 12 14 20 23 24 28 28 33 33 29 24 17 17 25 23 15 9 13 8 8 8 12 14 16 16 16 19 17 19 19 20 13 15 13 13 8 12 6 6 8 8 8 11 15 18 20 20 22 27 22 20 20 20 17 10 8 8 8 8 8 8 11 12 15 13 12 16 11 8 9 9 10 10 9 13 12 12 12 20 26 26 24 21	Open. Hide. 6 8 8 6 6 15 15 26 31 32 36 37 41 41 50 39 41 48 48 50 50 59 59 59 59 25 25 17 11 11 11 22 19 36 36 24 24 24 26 26 31 39 57 57 57 53 53 53 50 50 50 53 53 44 40 33 19 24 13 12 18 21 26 42 43 57 57 47 51 51 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 59 57 57 57 57 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 57 57 68 68 68 68 59 59 68 68 68 59 59 59 59 59 57 57 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 57 57 43 43 43 57 57 48 57 43 43 42 42 30 32 41 43 43 44 44 48 47 59 59 59 59 68 68 68 59 59 59 59 57 57 57 68 68 59 59 54 54 54 59 59 68 57 57 57 59 59 57 57 57 57 57 48 39 39 39 37 47 39 37 35 35 32 28 25 20 29 18 15 13 10 10 10 3 0 3 15 19 20 18 10 9 9 9 9 9 9 8 8 10 8 8 8 9 11 10 10 10 13 16 12 12 12 10 10 10 10 8 8 8 8 8 8 8 6 6 8 8 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 10 10 12 10 10 9 10 10 8 8 8 10 10 10 8 8 8 10 10 8 10 10 8 10 8 8 8 10 8 8 9 9 9 9 10 11 23 23 19 14 14 14 14 15 15 10 11 8 8 8 8 8 8 8 8 8 10 11 11 11 8 8 8 8 8 8 8 15 13 11 11 18 13 13 9 9 7 6 8 6 6 8 6 6 6 10 8 15 10 10 10 12 12 12 11 11 11 11 11 10 10 10 10 10 10 9 9 6 6 6 6 6 6 8 8 8 8 10 8 8 8 8 8 8 8 8 8 10 8 10 10 8 9 10 12 10 8 8 8 8 13 12 14 8 8 8 8 8 8 12 8 8 9 12 9 10 10 9 11 9 10 12 12 8 8 8 8 8 8 10 10 8 10 8 8 6 10 8 6 6 8 8 10 9 12 10 9 9 9 9 10 8 8 8 8 8 8 8 8 8 9 9 11 8 8 8 8 8 12 13 10 10 9 9 9 8 8 8 8 8 8 9 10 10 10 10 12 9 9 12 12 9 9 10 10 10 8 8 8 8 8 8 6 6 8 6 6 7 9 10 15 12 9 6 8 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no110_f16.g1 MSMg01no110_f16.g1 CHROMAT_FILE:
MSMg01no110_f16.g1 PHD_FILE: MSMg01no110_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:55 2005
         (351 letters)



>mm_chr2_73373267_73374017
          Length = 751

 Score =  642 bits (332), Expect = 0.0
 Identities = 344/348 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctttaagagagcagtcttggggtgtagccatttgggaggagggagctgcagttgctggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttaagagagcagtcttggggtgtagccatttgggaggagggagctgcagttgctggc 260

                                                                       
Query: 61  ttttatacttccaaaatttgcactcagatgagagatggttttgccactcccatggacctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttatacttccaaaatttgcactcagatgagagatggttttgccactcccatggacctg 320

                                                                       
Query: 121 aggcatccgagtccttgacacgaccatgcccatatcaagcaacacgcgttcactcatgat 180
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggcatccgaatccttgacacgaccatgcccatatcaagcaacacgcgttcactcatgat 380

                                                                       
Query: 181 ttcatctgttctttatacatcgactcaaggctcctcagctccccacaagaaagagattct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcatctgttctttatacatcgactcaaggctcctcagctccccacaagaaagagattct 440

                                                                       
Query: 241 ttaagagtatctcagaaattggccaaaaccattcaaccattcattacagggtcacacaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaagagtatctcagaaattggccaaaaccattcaaccattcattacagggtcacacaca 500

                                                           
Query: 301 taagagtgaaaccatttggaagtctccctccctccctccctccctccc 348
           |||||||||||||||||||||||||| ||| ||| |||||||||||||
Sbjct: 501 taagagtgaaaccatttggaagtctctctctctctctccctccctccc 548


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space:   253764
Effective search space used:   253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information