Query= MSMg01no110_l19.b1 MSMg01no110_l19.b1 CHROMAT_FILE:
MSMg01no110_l19.b1 PHD_FILE: MSMg01no110_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:25 2005
(198 letters)
>mm_chr2_161425517_161426117
Length = 601
Score = 327 bits (169), Expect = 3e-94
Identities = 189/197 (95%), Gaps = 3/197 (1%)
Strand = Plus / Plus
Query: 5 tgctttcagctatgttatgagtattat---aagctgaatgataaaaattgactaaaggga 61
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 205 tgctttcagctatgttatgagtattattataagctgaatgataaaaattgactaaaggga 264
Query: 62 ctgagttcacagtgtcaacctgcacgagctcttcctcaagtttgataccatatggattca 121
||||||||||| |||||||||||||||||||||| ||||||||| ||||||||| ||||
Sbjct: 265 ctgagttcacaacgtcaacctgcacgagctcttccccaagtttgacaccatatgggttca 324
Query: 122 atgtctttcggccacttccaggatctggctcattttcttcctgttttaaccctgccagga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgtctttcggccacttccaggatctggctcattttcttcctgttttaaccctgccagga 384
Query: 182 gagtgagatgaacaggt 198
|||||||||||||||||
Sbjct: 385 gagtgagatgaacaggt 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 198
Length of database: 601
Length adjustment: 8
Effective length of query: 190
Effective length of database: 593
Effective search space: 112670
Effective search space used: 112670
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no110_l19.g1 MSMg01no110_l19.g1 CHROMAT_FILE:
MSMg01no110_l19.g1 PHD_FILE: MSMg01no110_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:25 2005
(325 letters)
>mm_chr2_161601881_161602605
Length = 725
Score = 582 bits (301), Expect = e-171
Identities = 301/301 (100%)
Strand = Plus / Minus
Query: 25 gtctcacccctgaacttcactgggacatgggcctttaataaatgagcctctggggaaatc 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gtctcacccctgaacttcactgggacatgggcctttaataaatgagcctctggggaaatc 666
Query: 85 ccagatatgaagggtgaaattatgctagtggttacattgaatattcagatatatttggaa 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ccagatatgaagggtgaaattatgctagtggttacattgaatattcagatatatttggaa 606
Query: 145 agaattgtaattttaacaatatggactatttaatacatgaacatggaatctatttgccta 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 agaattgtaattttaacaatatggactatttaatacatgaacatggaatctatttgccta 546
Query: 205 tatattctttaattttttcacttttaaatatctaaatatttcacatattttgttaatact 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tatattctttaattttttcacttttaaatatctaaatatttcacatattttgttaatact 486
Query: 265 tagtattgtgatattatgagtagtaatgtttggttaattttattttcagaatgcttttct 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tagtattgtgatattatgagtagtaatgtttggttaattttattttcagaatgcttttct 426
Query: 325 t 325
|
Sbjct: 425 t 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
