Query= MSMg01no112_l07.b1 MSMg01no112_l07.b1 CHROMAT_FILE:
MSMg01no112_l07.b1 PHD_FILE: MSMg01no112_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:56 2005
(430 letters)
>mm_chr2_93998080_93998909
Length = 830
Score = 779 bits (403), Expect = 0.0
Identities = 421/427 (98%)
Strand = Plus / Minus
Query: 4 ggaattccgaattattggcaacaagtataaagttcattgtgggagctaaggcagtcattc 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ggaattccgaattattgggaacaagtataaagttcattgtgggagctaaggcagtcattc 571
Query: 64 aaaaaaatggagcgaaagcgtgctccgcagacaaaggggaaccgtaagccttcatctgaa 123
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 570 aaaaaaatggagcgaaagcgtgctctgcagacaaaggggaaccgtaaaccttcatctgaa 511
Query: 124 aagtctgaggaattaacaatccgaaagcggttattactaagacgtaaacacaagcactac 183
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 510 aagtctgaggaattaacaatccgaaagcggttattactaagacgtaatcacaagcactac 451
Query: 184 tcctgctcctcctggacttctactatattcttccctttccggttccattccttcctgaaa 243
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tccagctcctcccggacttctactatattcttccctttccggttccattccttcctgaaa 391
Query: 244 tgtgagctaaacccagttaggtatcactggccaatcagcgcgcagccttccgcagtcgta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tgtgagctaaacccagttaggtatcactggccaatcagcgcgcagccttccgcagtcgta 331
Query: 304 agggccgcctctgccaatgagagatccctgcgcttcggtggtgcgaggtaaagcttgtgg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agggccgcctctgccaatgagagatccctgcgcttcggtggtgcgaggtaaagcttgtgg 271
Query: 364 gcggagccaaacgttgagcggcttgtgagcgagccactgtcttaatacggaaatgcggct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gcggagccaaacgttgagcggcttgtgagcgagccactgtcttaatacggaaatgcggct 211
Query: 424 ctgagcg 430
|||||||
Sbjct: 210 ctgagcg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no112_l07.g1 MSMg01no112_l07.g1 CHROMAT_FILE:
MSMg01no112_l07.g1 PHD_FILE: MSMg01no112_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:56 2005
(418 letters)
>mm_chr2_93863845_93864662
Length = 818
Score = 692 bits (358), Expect = 0.0
Identities = 407/434 (93%), Gaps = 19/434 (4%)
Strand = Plus / Plus
Query: 1 caaaggcagtaaagaggagctagagatggcttcagagttaagagcacttgcagctcatgc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 caaaggcagtaaagaggagctagagatggcttcagagttaagagcacctgcagctcatgc 260
Query: 61 aaagggctcaggtttgatgtctcacaccgacatggctcaaaaccatctgtaaactccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagggctcaggtttgatgtctcacaccgacatggctcaaaaccatctgtaaactccagc 320
Query: 121 tccagatgacctgatgccctcctctggcactgatgtacaattccacaggcaggcaaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccagatgacctgatgccctcctctggcactgatgtacaattccacaggcaggcaaaaca 380
Query: 181 tccatacacgtaaaataaaaataaatcttattaaatattaaaattatgaacgcaaataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccatacacgtaaaataaaaataaatcttattaaatattaaaattatgaacgcaaataaa 440
Query: 241 cggttcctctttttcagttgattgcctgagttatttaaacatcttaacagtaacagaaag 300
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 cggttcctctttttcagttgactgcctgagttatttaaacatcttaacaataacagaaag 500
Query: 301 aggctaa-aggtcgggcagtggtggcaca-----------------cttgggaggcagag 342
||||||| || | |||||||||||||||| ||||||||||||||
Sbjct: 501 aggctaacagtt-gggcagtggtggcacatgcctttaatcccagcacttgggaggcagag 559
Query: 343 gcaggtggatttctgagttcgaggccagcctgggggacagccagggctacacagagaaac 402
|||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||
Sbjct: 560 gcaggtggatttctgagttcaagaccagcctgggggacagccaggcctacacagagaaac 619
Query: 403 cctgtcttgaaaaa 416
||||||| ||||||
Sbjct: 620 cctgtctcgaaaaa 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
