Query= MSMg01no113_p21.b1 MSMg01no113_p21.b1 CHROMAT_FILE:
MSMg01no113_p21.b1 PHD_FILE: MSMg01no113_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:35 2005
(652 letters)
>mm_chr2_108818901_108819961
Length = 1061
Score = 1178 bits (609), Expect = 0.0
Identities = 642/657 (97%), Gaps = 9/657 (1%)
Strand = Plus / Plus
Query: 4 ggaattcctagattctacaaccatgagaag-aaacatcatttctagagcccactaaatag 62
||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctagattctagaaccataagaagtaaacatcatttctagagcccactaaatag 263
Query: 63 agacatttttcaaccatttgtccattctgtttcttagttccatgatactcttggaaaatt 122
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 264 agacattcttcaaccatttgtccattctgtttcttagttctatgatactcttggaaaatt 323
Query: 123 ctagttcatcactatgccctacctcaaacatggaggtatttgtatttcaatcttttcctg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctagttcatcactatgccctacctcaaacatggaggtatttgtatttcaatcttttcctg 383
Query: 183 ggtcctaacatagggaaatatgtaacaatgtctttatgcactagatacgtccttttaacc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggtcctaacatagggaaatatgtaacaatgtctttatgcactagatacgtccttttaacc 443
Query: 243 acatggtagcatggccagtgattcacatgtacaactcttccaggaaatgctgaggtcctc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acatggtagcatggccagtgattcacatgtacaactcttccaggaaatgctgaggtcctc 503
Query: 303 aaggacatgctagcaaagttcaacaaatccaagtgtttgccaaattgaatgaactgactc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaggacatgctagcaaagttcaacaaatccaagtgtttgccaaattgaatgaactgactc 563
Query: 363 acacctggaaaaaaaaaa-ggattctgttcaaaagatgcattttgcttt-------ctac 414
|||||||||||||||||| ||||||||||||||||| |||||||||||| ||||
Sbjct: 564 acacctggaaaaaaaaaaaggattctgttcaaaagacgcattttgctttttgctttctac 623
Query: 415 atttcaaattttgcaatcctacatcttttttaaaaattgtatccccattaacattttata 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atttcaaattttgcaatcctacatcttttttaaaaattgtatccccattaacattttata 683
Query: 475 gagttaagacttaataacagttaagaagtagaaagcaaaaatagttgccccacttcttcc 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gagttaagacttaataacagttaagaagtagaaagcaaaaatagttgccccacttcttcc 743
Query: 535 agggttctctgcttccctgttttccactgacacatcacattttgatacgatttttttctt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agggttctctgcttccctgttttccactgacacatcacattttgatacgatttttttctt 803
Query: 595 acttccaagctcccatggcctctatctttgcaataatatgcaatgacccattatgca 651
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 acttccaagctcccacggcctctatctttgcaataatatgcaatgacccattatgca 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1061
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1051
Effective search space: 674742
Effective search space used: 674742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no113_p21.g1 MSMg01no113_p21.g1 CHROMAT_FILE:
MSMg01no113_p21.g1 PHD_FILE: MSMg01no113_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:35 2005
(221 letters)
>mm_chr2_108875288_108875908
Length = 621
Score = 420 bits (217), Expect = e-122
Identities = 220/221 (99%)
Strand = Plus / Minus
Query: 1 atgcaggtgctttcagggaaatgaaaggatatctgacattgataaagtgagagagtttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgcaggtgctttcagggaaatgaaaggatatctgacattgataaagtgagagagtttaa 362
Query: 61 gctgtttaaatctaccacttggtttgagttgtattctttccccttctcaggctcagggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctgtttaaatctaccacttggtttgagttgtattctttccccttctcaggctcagggct 302
Query: 121 tgcatattttctgagcatttctttcttcagctttagtgctcaatagcctttgtagaagca 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 301 tgcatattttctgagcatttctttcttcagctttagtgctcaataggctttgtagaagca 242
Query: 181 gaggggttttatattaaccagatgagtgcgtatggatgaaa 221
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaggggttttatattaaccagatgagtgcgtatggatgaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 621
Length adjustment: 9
Effective length of query: 212
Effective length of database: 612
Effective search space: 129744
Effective search space used: 129744
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
