Query= MSMg01no114_g11.b1 MSMg01no114_g11.b1 CHROMAT_FILE:
MSMg01no114_g11.b1 PHD_FILE: MSMg01no114_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:05 2005
(453 letters)
>mm_chr2_166450038_166450892
Length = 855
Score = 783 bits (405), Expect = 0.0
Identities = 438/449 (97%), Gaps = 2/449 (0%)
Strand = Plus / Plus
Query: 7 attccctgttca-ttcagaacgcagctaaactcaggtttctctgggtaaagtcagaacag 65
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attccctgttcatttcagaacgcagctaaactcaggtttctctgggtaaagtcagaacag 266
Query: 66 aaccaggttccaaggagacagactgccagcctgaaaattccgggacccacatccaaagtg 125
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 267 aaccaggttccaaggagacagactgccagcctgaaaattccgggacccacacccaaagtg 326
Query: 126 acagctgtatgaacttacagggtccaaggggtatttctgaaaggaactccaagctatttg 185
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 327 acagctgtatgaacttacagggtccaagaggtatttctgaaaggaactccaagctctttg 386
Query: 186 ctaagcaccttgggagaatgatgaccaaaaaa-gccactgggccccactggagttcagag 244
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 387 ctaagcaccttgggagaatgatgaccaaaaaactccactgggccccactggagttcagag 446
Query: 245 cgtccagtaggcagaccagggggacagtggctgggtggagttaattacatccttatgatg 304
|||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 447 cgtctagtaggcagacgagggggatagtggctgggtggagttaattacatccttatgatg 506
Query: 305 gttagagttttccttgaccaagaggtctgccttataaagcagtgggcaccccatcactag 364
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gttagagttttccttgagaaagaggtctgccttataaagcagtgggcaccccatcactag 566
Query: 365 gggcatcgatgagaggttcaagtctcctgtgcatcttgcttcccagaccctgctgccagg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gggcatcgatgagaggttcaagtctcctgtgcatcttgcttcccagaccctgctgccagg 626
Query: 425 agacagaggcagcccacatccaccctttg 453
|||||||||||||||||||||||||||||
Sbjct: 627 agacagaggcagcccacatccaccctttg 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 855
Length adjustment: 10
Effective length of query: 443
Effective length of database: 845
Effective search space: 374335
Effective search space used: 374335
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no114_g11.g1 MSMg01no114_g11.g1 CHROMAT_FILE:
MSMg01no114_g11.g1 PHD_FILE: MSMg01no114_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:05 2005
(133 letters)
>mm_chr2_166551054_166551587
Length = 534
Score = 244 bits (126), Expect = 2e-69
Identities = 132/134 (98%), Gaps = 1/134 (0%)
Strand = Plus / Minus
Query: 1 acatctcccatga-ttttttttttcttttaagcttcatgttgggtcaccaagatggctca 59
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 acatctcccatgatttttttttttcttttaagcttcatgttgggtcaccaagatggctca 275
Query: 60 gcgttccctgggactgattggtggaaaaagagaactaacacccataatgttacggataca 119
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gcgatccctgggactgattggtggaaaaagagaactaacacccataatgttacggataca 215
Query: 120 tgtgtgcatataca 133
||||||||||||||
Sbjct: 214 tgtgtgcatataca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 133
Length of database: 534
Length adjustment: 8
Effective length of query: 125
Effective length of database: 526
Effective search space: 65750
Effective search space used: 65750
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
